Ll_transcript_449079

• Id Trinity: TRINITY_DN50624_c1_g2_i2
• Name Transcript: Ll_transcript_449079
• Sequence: AGACAACGTATGTAGCAAAAATATTTAATATGATAATGTCAGTGTGAAGAACTCACGAGTTACGATCGGATCATTACAAAATCTACTTGCTTCTGTCTCC CTCTCTCTTTAATTTCCTAAGCACAGCATGGTAAAGTAAACATTCACTGATCCACATAGCAACCAAAAACCAAACTCAGGTTACTGTTGTTTCTTCAATT TGTGTGTCCCAACTTTCAAGCTACATAGCTTAACAAAATCTACCACCACATCATATTCAACCTCATTTTATTCTTTGTACTTTTTACTGCTCTTTGCTCC TGCTATTCACCACAACAAGGAGCATTCATAGTTAAGCTTCTTTGTGAGACAATTTTGATTGGTTAGAGAATGTCAAGGCCTCTGCAGAGAGGGGTTACTG GGGTTAGGACTCCAGATTCCAAATCCAAAGATAAATCAGAAATGGAAGATTGGGATAATAAGAGAAGTTCTTCAGATCACAGCCCTTTATCCCCTTTTCG GTTACATTTTGCGGATAATAATTCTCATTCTAAATATGGCATCAATGAAAATGGTTTTACTTCTGATCCCTTCATTGTTGGCTCCCCACGAAGTCGGGTT AAGTTGATGATGCTTTTAATGAAGTTTAGTCTAGCGTTTATAGTTGTTCTTGCTCTCACTGGATCCTTTTGGTGGACGATGTCGATTTCGTCCTCATCAA GAAGTCACATTTACCATGGTTATAGAAGGCTCCAAGAGAAACTTGTATCAGACCTGATTGATATTAGTGAGTTAAGTAGTGGTCCATCAAAGTTTAAAGA ATTGGAATCCTGTTCCGAAGAGCTCGAAAATTTTGTGCCTTGTTTCAATGTTTCTGAGAATCTAGCTCTTGGTAGTACTGATGGAAATGAGTTTGACCGG CAATGCAGTCGTGAGCTCAGGCAATATTGTTTGGTTCTCCCGCCCGTGAATTACAAAATTCCTCTTCATTGGCCTACTGGAAGAGATGTCATCTGGATTG CTAATGTCAAAATCACTGCAGAGGAGGTTCTTTCTTCTGGAACATTGACCAAGAGGATGATGATGTTGGACGAGGAACAAATTTCATTTCGTTCAGCCTC TCATATGTTTGATGGCATTGAAGACTACTCACATCAAATTGCAGAAATGATGGGACTTAGAAATGAATCTTACTTCATACAAGCTGGGGTTCGAACGATA TTGGATATAGGTTGTGGCTATGGTAGCTTTGGAGCACATCTCTTTCACAGTCAGCTTTTAACTACGTGCATTGCAAACTATGAGCCTTCTGGCAGTCAAG TTCAGCTCACTCTCGAGAGGGGTCTTCCTGCTATGATTGCTTCTTTCACTTCAAAACAGTTGCCATATCCGTCTCTCTCTTTTGATATGTTACATTGTGC ATGGTGTGGCATTGATTGGGACAAGAAAGATGGCACTCTCTTGATTGAAGCTGATAGACTTCTAAAACCGGGTGGGTACTTTGTCTGGACATCACCACTT ATAAAATCGCGTAACAAAGAGGATCAGAAACGGTGGAAGTTGGTACAGGATTTTACAGAAAATCTTTGCTTCGAATTGTTGTCACAGCAAGATGCAACTG TCGTTTGGAAGAAAACTAGTAAAAAGAGTTGCTATAGTTCAAGAAAGTCTAGTTCTGCCCCTCC
• Tissue: pods
• Gene name: LI_gene_178641;
• Additional information: details;

Expression of Ll_transcript_449079

FPKM

• PAB: 1.7
• PNAB: 7
• PS1: 5.8
• PS2: 3.8
• PS3: 5.4
• PW1: 3.6
• PW2: 7.4
• PW3: 7.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_449079

• Blastp: Probable pectin methyltransferase QUA2 from Arabidopsis with 64.14% of identity
• Blastx: Probable pectin methyltransferase QUA2 from Arabidopsis with 64.51% of identity
• Eggnog: pectin methyltransferase(ENOG410Y9W6)
• Kegg: Link to kegg annotations (AT1G78240)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460930.1)
• Pfam: Putative S-adenosyl-L-methionine-dependent methyltransferase (PF03141.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;