Id Trinity | TRINITY_DN50626_c2_g4_i3 |
---|---|
Name Transcript | Ll_transcript_451356 |
Sequence | CATCTCCCCACTTTTCACTTTTTCCATGTGATTGACCGACTATGTGAGAGAAGACAAACAAATATAATTATCATATATTTTTAGACTAATTCTTTTCCGA TGATAAAGTGGCATATGTTATATGACATGGATGATAAAGTGATTGTGTAATGTCTGTCTTCATTAATAATTGATTTACAAATAACGTATCTTAATATTAT GTCGGAGTCTATATGAGTCCTCATATATAATCTCTCTCAGCTTCTCTCTTCCTATATCTCCTCTTCCTCATTCTCCTTCCATATCGCAACACTAATCAAC ATGGGACTGGAATATAATACTGCAGAAGGGTTGCATGTTAAGGCCGAGGTATTACATTGGAATAAAGATTATCTGTCTCCGGTGGTGTTCGGCAGCAATC AGATTTTAACGAGTAATATAAAAATGTTACTTTTTGTTGGTAAAAGTTTTCTTTTTATTTACATGGTAATATCTGATTGCTCGGGAAAAGTACAGGTGAT CTCTGTCCGTTACATCGGATACCTCTATTTCCTTTGTTCCCCTACCTCACATATTTGTAATGAGTAGAAGTTTTCACAGTATGCATAAATCATCTATGAT AAAAGTATAAGCTGTTTTCCCATAACCTTTATTGAGAAGCTAACCCTTTCAAAATGGTATTCACTGAGTGGTAACATATTATAGAGGGAGGGTCAAATTG CACAATGCATAGGTTCAAGAGAGAATATTGTAATGGTTAACAATCTAGTAATGTAAATTTCACCATATCCATTAGTGAAGGGGTTTTAGTTACTAATGAT TTAAACATGTAATGTAGTTTGTTTTGACCCTAAAACATACAATTTGTTTTTACCTGATTATTTTGGATAATGCTATGCATCTATTAGTTCTATTTGCATA TTCATATTACATTATTCACCATAGACATGTATTATCCCCATCCATGAAATTTTGACCCTCAACTTGAAGGAACATTAATTTAACTATTAAGTTGTAATTT GTTTTCTCTTTTTTCTTTGTTACCTTTAAATATTAGCAATCATTTGTTGTTCTTTTTCATTGAGTAAGAACTTAAATGGCGAAAAGATTGAGTATGACCA TATGAGCTTGTTTATCTGCTTGAGTTCAGTATCAGCCAAGTCATTTTTGTATTTCAATCATGTCTCTGCAATTTTACAGGCAAATGCAGCGTCGGGTATG GCAGTCCATGATGACTGCAAGTTAAGGTTTTTGGAGCTTAAGACAAAGAGGGCACACAGGTTCATTGTTTTTAAGATTGAGGAGAAGCAGAAGCAAGTCG TTGTGGAGAAGCTTGGTGAGCCAGCCCAAGGCTACGAAGATTTCACTGCTAGCCTTCCTGCTGATGAGTGTCGTTATGCTGTTTATGATTTTGAGTTTCT GACCGAAGGAAATGTCCCGC BLAST |
Tissue | pods |
Gene name | LI_gene_178658; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_451356
Blastp | Actin-depolymerizing factor 4 from Arabidopsis with 82.05% of identity |
---|---|
Blastx | Actin-depolymerizing factor 4 from Arabidopsis with 82.05% of identity |
Eggnog | actin-depolymerizing factor(ENOG41122P5) |
Kegg | Link to kegg annotations (AT5G59890) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_006586815.1) |
Pfam | Cofilin/tropomyosin-type actin-binding protein (PF00241.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |