Ll_transcript_449331

• Id Trinity: TRINITY_DN50632_c2_g1_i8
• Name Transcript: Ll_transcript_449331
• Sequence: GGTGAATATATGTTTGGATTAGAGATTAGAGATACTCGTTTTTATTCCCCCTTATATTATGCTGCATGAAAGTTGTAATTATTTCATACTTGAGTTAGTT GAGTATGAGATATAAGCGTGTATTTGTTTGAGGGCAATTTTATCTACACCAAAAACCATTGCTCACACTGAGACGGATGAACAGATGGGTGTGAGCAATG TTTTTTGGATCTATATTAATGGATGGTCCATTCATTTATGTATGAGCAATGGTATTTGGGTGTTGTTAGAATTGCCCTCAAGTGTTTATATGCAGATAAG CTTGTCTTTTGTCATTCTCGATGGAATGGATGCTTGGTTACAATTTTGAAGATAAGTGTTTATATGCCTGGCTCCTAATTAATCTGGTTCAAAATGAAGA AACTGGCTTGATTATTAGACTGTAATTTTTTTATTCTTATTTCTAAATCCAGTGTCTGTAAGATTCATTTGTTACATGAGATAAGCACTAGCAACATGGC CATATCTCACTTTTTGTAGTTATCAAATATCTACTGAAAACTGAGGTCTGTATGGGTGTTTGAGACTTGTGTTGTTGGTAAGTTCCAGACGACTCATGTC ATTTAGGTCAACTTTAGTTTGCCCACATGTAGTTTTGAATGTCTCACTTTTCTCACCCGTGTCTTCTTTTTTACTGTCAATCACCTGGTAAATTACACCT TTTTCTTTCTACCGCAGCTGCTTAATAGCCAGGAATCTCTTAAATGGTGTAAAGACATGTTGGGATGTATTCCAACACATTAATTGCGAAGAAGGAAAGA TGTCAGGTCCTGGTGGTGATGCTGCAAACTCTTTCGTGGAAGGCTATTCTAAGGGTAATAATGAAGTGAGGCGAAGGTCAAGGTTTTTACGTAGAAGAGG AAGAGTTCGTCGCTTGAAGTATACCTGGAAATCTGCTGCCTATCATTCAATTAGGAAAAGGATTACTGATAAGAAGGATCAGCCATGCCGGCAGTACAAT CCTTGTGGTTGCCAAACAGCTTGTGGAAAGCAGTGTCCTTGTCTTTTAAATGGAACCTGCTGTGAGAAATATTGTGGGTGCCCCAAGACTTGCAAGAATC GATTTCGTGGCTGTCATTGTGCTAAGAGTCAATGCCGAAGCCGTCAATGTCCATGCTTTGCGGCAGATAGAGAATGTGATCCAGATGTTTGTCGGAATTG TTGGGTTAGTTGCGGTGATGGTACTCTTGGAATTCCTAGCCAAAGAGGTGATAATTATGAATGTAGGAACATGAAACTTCTTCTTAAACAACAGCAGAGG GTTCTTCTTGGAAGATCTGATGTATCTGGATGGGGAGCCTTCTTAAAGAATAGTGTTGCCAAGCATGAATACCTTGGAGAGTATACTGGAGAGTTGATTT CTCATCGGGAAGCAGATAAGCGAGGAAAGATATATGACCGTGAAAATTCATCTTTTCTCTTTAATCTGAATGATCAGTTTGTTCTTGATGCTTACCGTAA AGGTGACAAATTGAAGTTTGCGAACCATTCTCCTGATCCCAATTGCTATGCAAAGGTTATTATGGTTGCTGGGGATCATAGGGTAGGCATTTTTGCCAAG GAACGGATCGGTGCTGGGGAGGAACTATTTTATGATTATCGATATGAGCCCGACAGAGCTCCTGCTTGGGCCCGGAAGCCAGAGGCATCTGGATCAAAAA AAGATGATGGTGCTCCCTCAAATGGTCGTGCAAAGAAGCTTGCTTAGCGAGGTTTCATTAAGATTTAAAAACAATTCTTTTGTTATTCTTTCATACGAGT AGAGGAAGTAATATTTAAGAGGAAAGGATATTTTTTGTAGTTTTTCTTGTTTGTAGCAAGGTCATGCACAACTGTTGCGGCCTAGGTAACTAACTACATT TAAACAATTCATTTTGATGTCTTAGCTGACTGTATTTGTTACTCTAGACCGAAAATACAAGCTTACGATTCAAAATTTCCCCATTATCTTTTTCGCAAGG GTGAATGGGCAATGCAAATAAGAGTGTAACATCATAG
• Tissue: pods
• Gene name: LI_gene_178707;
• Additional information: details;

Expression of Ll_transcript_449331

FPKM

• PAB: 0.4
• PNAB: 0.2
• PS1: 0.2
• PS2: 0.3
• PS3: 0.1
• PW1: 0.2
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_449331

• Blastp: Histone-lysine N-methyltransferase CLF from Arabidopsis with 86.94% of identity
• Blastx: Histone-lysine N-methyltransferase CLF from Arabidopsis with 84.62% of identity
• Eggnog: Histone-lysine N-methyltransferase(COG2940)
• Kegg: Link to kegg annotations (AT2G23380)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444689.1)
• Pfam: SET domain (PF00856.27)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;