Ll_transcript_451512

• Id Trinity: TRINITY_DN50634_c1_g1_i1
• Name Transcript: Ll_transcript_451512
• Sequence: AAAGCCATAACATTCCATTCTCACACAAGTGCTAGAGCCTTATCCCCTAGCCGCTTCTTTCTCTCTGAGGTTTTTGCTCTTTAAACCTCTTCTTCACCAA AATGGCTTCTTCAATCATAGGCGTTTCTTCCATTTACCAAACCCCTTCTCTTCAACGACAACAACAAAGAAACCCTTCCGTTTCATTGAAACCATTGTCG TTTCACAACAACATCAACAACGATAACTCCCACTTCAACACTCTTCTCAGAGCTCACCTTTATAATCGCAGAATTTCTGCCATTGCTACCAACAATTCTT CCTTACTCGCTGAAGAAGCGCTTCATGGATTAGGCTTTGATGATGTCACTGATGATAACGATGATTTTGATAGTTTTGATTTTGAGAATGAAAATGAAAA CCCTCCTGCGACTATTAGCACCGATGAGCTTGATGTTTCTAAGCTGGATTTGCCTTCGCGACTCGTGGAATCGCTTAAGAAACGTGGAATCACTCACCTT TTCCCTATTCAGAGAGCTGTGCTAGTCCCTGCACTAGAAGGTAGAGATATCATTGCTCGGGCAAAGACAGGGACTGGCAAGACATTAGCATTTGGAATTC CAATTCTTAAAGGCCTCACTGATGATGACCAGAATCCTATAAGGCGTGGTCGTCTTCCTAAAGCATTGGTCCTTGCGCCTACTAGGGAGTTAGCAAAACA AGTAGAGAAAGAGATCAATGAATCTGCACCTTATCTGCACACAGTTTGTGTTTATGGTGGTGTTTCCTATGTAACTCAGCAAAGTGCACTTTCGCGTGGT GTTGATGTAGTAGTTGGAACACCTGGTAGAATAATTGACCTGATAAATGGTAACACCCTTAAACTGAGTGAAGTTCAGTATTTGGTCCTCGACGAAGCTG ATCAAATGCTTGCTGTTGGGTTTGAGGAGGATGTGGAAGTGATTTTAGAAAAGCTACCATCGAAGAGGCAGAGCATGCTTTTTTCCGCAACAATGCCAGC GTGGGTGAAGAAATTGGCTAGAAAATATTTGGATAAACCATTGACAATTGATTTGGTTGGTGATGAAGACGAAAAGCTCGCTGAAGGGATAAAACTTTAT GCTATATTAGCCACCGGCTCGTCAAAACGGACAATTCTTTCTGATCTTATAACCGTTTATGCAAAGGGTGGGAAGACTATAGTTTTTACGCGTACAAAAA AAGATGCTGATGAAGTATCATTGTCATTAACAAATAGTGTAACTTCTGAAGCACTGCATGGTGATATATCTCAGCATCAGAGAGAGAGAACATTGAATGG TTTTCGGCAAGGGAAATTTACAGTGCTTGTTGCCACTGATGTTGCTTCTCGTGGACTTGATATTCCCAATGTTGATTTGGTTATCCATTATGAACTTCCA AATGACCCTGAGACTTTTGTACACCGCTCTGGGCGTACAGGGCGTGCAGGAAAACTAGGTACTGCTATTCTGATGTACACCAGTAGCCAGAGGAGAACAG TTAGATCCCTTGAGCGTGATGTAGGCTGCAAATTTGAATTTATTAGTCCACCAGCAATTGGAGAGATTTTGGAGTCATCTGCCGATCAAGTTGTTGCTAC ACTTAAACTTGTTCATCCCGAGTCAATTGAGTTCTTCACCCCAACTGCAGAAAAACTGTTTGAAGAACAAGGCACAAGTGCCCTTGCAGCTGCACTAGCA CAGCTGAGTGGATTCTCTCGACCTCCATCATCCCGGTCTCTTATCAACCATGAACAGGGATGGGTAACATTACAACTGACTCGAGATGGCGATAACTCTA GAAGATTTCTTTCTGCAAGATCAGTAACTGGGTTTCTTTCTGATGTTTATTCTCCAGCTGCTGATGAAGTTGGAAAAATACACTTAATTGCAGATGAAAA GGTTCAAGGAGCAGTTTTTGATCTTCCGGAGGAGATTGCTAAAGAGTTACTTGCTAAGGTGATACCACCAGGAAACACTATTACAAAGATCACCAAGTTG CCTCCTTTGCAAGATGATGGACCTGCAAGTGATTTCTATGGGAGGTTTTCCGACGACAGAGAACAAAGAAGTTCTAGAAATTCAAGAGGAGGTTTTAAGA GCTCACAGTCATGGGGAGGTGGACGAAACTCTGACGATGACTTTGGTAATTCATACGGTAGAGGCGGCGGTAGAGGTTATAGATCTAGCAACAACAACAG GTCTCAAACGAGGAGAAGCAGTGGTGATGACTGGCTGATTGGAGGTAGAGGTTCAAGCAGATCTTCATCATCAAACAGAAGTAGCTATGGAGGAGGAAAC TATGGAGGAGGGGCCTGTTATAATTGTGGACAAACTGGGCATAAGGCATCAGAATGTAAGAACAGAGACTTTTTTTAGTTAGCACATCTTAAAATTTAAT GCTACCTTGTCCATAACTTGAGCTGCTGCCACTGGTGATGATGGTCTAGTAGGTTCTAGAATTTGAAATATGTTTCTCTAGGGAATTACAGAATCAATGT TATTTAATTTGAAGCTCTTGGGGTTTTGGCTTTAGATGTATTACAGTCTATACCGCTGATGTAAAATTTAAAACTTGTATTGTGGCTGTGATATTTAGCA AGAACAGTAACTCTGATCCTGTTTGTCTATTAAACGGTCTTGTTTATGATCCTGATTAGCCTTCACATGGTTTAAAAAGGACAGGAATAGCTTTATATGC AGAATTTGTTCCCAGCTGTTGTTCATAATATTATATTCTTTATAAACTAGTTGGTCTTTGTTTATTATTTTCCATCAATTTAG
• Tissue: pods
• Gene name: LI_gene_178724;
• Additional information: details;

Expression of Ll_transcript_451512

FPKM

• PAB: 0.6
• PNAB: 15.9
• PS1: 7.7
• PS2: 5.7
• PS3: 8.3
• PW1: 11.7
• PW2: 8.8
• PW3: 5.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_451512

• Blastp: DEAD-box ATP-dependent RNA helicase 3, chloroplastic from Arabidopsis with 73.15% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 3, chloroplastic from Oryza sativa with 80% of identity
• Eggnog: purine NTP-dependent helicase activity(COG0513)
• Kegg: Link to kegg annotations (AT5G26742)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452324.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;