Ll_transcript_451523

• Id Trinity: TRINITY_DN50634_c1_g1_i11
• Name Transcript: Ll_transcript_451523
• Sequence: AAAGCCATAACATTCCATTCTCACACAAGTGCTAGAGCCTTATCCCCTAGCCGCTTCTTTCTCTCTGAGGTTTTTGCTCTTTAAACCTCTTCTTCACCAA AATGGCTTCTTCAATCATAGGCGTTTCTTCCATTTACCAAACCCCTTCTCTTCAACGACAACAACAAAGAAACCCTTCCGTTTCATTGAAACCATTGTCG TTTCACAACAACATCAACAACGATAACTCCCACTTCAACACTCTTCTCAGAGCTCACCTTTATAATCGCAGAATTTCTGCCATTGCTACCAACAATTCTT CCTTACTCGCTGAAGAAGCGCTTCATGGATTAGGCTTTGATGATGTCACTGATGATAACGATGATTTTGATAGTTTTGATTTTGAGAATGAAAATGAAAA CCCTCCTGCGACTATTAGCACCGATGAGCTTGATGTTTCTAAGCTGGATTTGCCTTCGCGACTCGTGGAATCGCTTAAGAAACGTGGAATCACTCACCTT TTCCCTATTCAGAGAGCTGTGCTAGTCCCTGCACTAGAAGGTAGAGATATCATTGCTCGGGCAAAGACAGGGACTGGCAAGACATTAGCATTTGGAATTC CAATTCTTAAAGGCCTCACTGATGATGACCAGAATCCTATAAGGCGTGGTCGTCTTCCTAAAGCATTGGTCCTTGCGCCTACTAGGGAGTTAGCAAAACA AGTAGAGAAAGAGATCAATGAATCTGCACCTTATCTGCACACAGTTTGTGTTTATGGTGGTGTTTCCTATGTAACTCAGCAAAGTGCACTTTCGCGTGGT GTTGATGTAGTAGTTGGAACACCTGGTAGAATAATTGACCTGATAAATGGTAACACCCTTAAACTGAGTGAAGTTCAGTATTTGGTCCTCGACGAAGCTG ATCAAATGCTTGCTGTTGGGTTTGAGGAGGATGTGGAAGTGATTTTAGAAAAGCTACCATCGAAGAGGCAGAGCATGCTTTTTTCCGCAACAATGCCAGC GTGGGTGAAGAAATTGGCTAGAAAATATTTGGATAAACCATTGACAATTGATTTGGTTGGTGATGAAGACGAAAAGCTCGCTGAAGGGATAAAACTTTAT GCTATATTAGCCACCGGCTCGTCAAAACGGACAATTCTTTCTGATCTTATAACCGTTTATGCAAAGGGTGGGAAGACTATAGTTTTTACGCGTACAAAAA AAGATGCTGATGAAGTATCATTGTCATTAACAAATAGTGTAACTTCTGAAGCACTGCATGGTGATATATCTCAGCATCAAAGAGAGAGAACATTAAATGG TTTTCGGCAAGGGAAATTCACAGTGCTTGTTGCCACTGATGTTGCAGCTCGTGGACTTGATATTCCCAATGTTGATTTGATCATCCATTATGAGCTTCCC AATGATCCTGAAACTTTCGTACATCGCTCTGGTCGTACCGGGCGTGCAGGAAAAGAAGGTAATGCCATCCTGTTGTATACCAGTAGCCAGAGGAGAACAG TTAGATCCCTCGAGCATGATGTAGGCTGCAAATTCGAGTTTGTTAGTCCACCAGCTATGGAAGAGATTTTGGAGTCATCTGCTAAGCATGTTGTTGCCGC ACTTAATGGAGTTCATCCCGAGTCTGTTACATTTTTCACCCCAACTGCCGAAAGATTGATTGAAGAACAAGGAACAAGTGCCCTTGCAGCTGCACTAGCA CAGCTGAGTGGATTTTCTCGACCTCCATCATCCCGGTCTCTTATCACCCACGAGCAGGGATGGGTTACACTGAAACTGACCCGAGATTCAGATATTTCCA GAAGATTTTTTTCAGCCAGATCAGTCACTGGGTTTCTTTCAGATGTTTATTCTCCAGCTTCTGGTGAAGTTGGAAAAATACATATAATTGCAGATGATAG GATTCAAGGAGCCATTTTCGATCTTCCCGAGGATGTTGCAAAAGAGTTACTTAAAAGGGAGATACCTCCTGGAAGCACTATTTCGAAGATCACCAAGTTA CCTCCATTGCAAGATGATGGGCCTCCAGGTGACTCCTACGGGAGGTTTTCTGACAGAGATCGAAGTAGCCGAAGAGGTTCTAGGGATCAAAGAGGTTTTA AGGCCTCACGGGGATGGGGCGGGAGCGGTGGCCGCGGCCGAGGCTCTGATGATGATTTTGGTGATCCATTTAGGAAAGGTGGTAGAAGTAATAGGTCCGG TGGCAGCAGCCGGTCTCGAACAGGAAAAAGCAGTGAGGATAATAGGCTAATTGGAGGTAGACAATCAAGCAGGTTTTCATCATCAGACAGGTTATAGTAG ACAAGTTAAAGAAGCTTTTTTATCTTGTTTTATGATTTTCTTCCTATAAGTTATAATAACCTTCATCACAAGCAACTTAATTTAACACTTACCACATAAG AGATTATGACCTTCCTAAAGTTCATTTTAGCTTCTCTGATAAGCTTATTGAAATAAGCTAAAAAGAGCTTACAAGAAGGTCATAACCTATTTTTATAAGC TCTTTCAAACACATGCTTAAGTGCTTATATGATAATAAGATAAACCTATAAAGTAAATAAGCCTTTCTATATATTCTTTCAAATGCCCCTAAGTTTATGT ATATTTGTATTATGTAGCTGATATGTTATTTGAATGTGCATTTCAGAGGTAGCTTTGGAGGGTCTTGTTTCAATTGTGGAGGATCTGGGCATAGAGCATC AGATTGTCCAAACAATGGAGGCTTTTTTTTAGTTTCCAAATCTTCGATTTTCGGCATTTCCGAAGACTTGAGCTACAGCCATTGTTATTGGCCTAATAGG TTCAGTGAAATTCAAGAATTATAGGGTCAATATTAATTTGCATATCTCATATTGACATTAAAGTCCATAGGGTCTTAGTTTTTGGTCCTGGTTTTTTAAT AGTGTTGATGTATAATCTATAATCTATAATCTATAATCTATAATCTATAATCTATTTAGGGCAGTGATATTTGAGTAGAACAGTTACCTGTGATTTTGTA TCTTTTGCTGTTATTGTTGGTTGATGTATGGTTTTGTACTCTACTTAATTGTCTTGTTTAAGAACTCTAATGATAACAAGACAATATTAACTTTCAAATG AATGAAAGGTGAAAGGCCAAAAGTTTATGCAAAGTAAAAA
• Tissue: pods
• Gene name: LI_gene_178724;
• Additional information: details;

Expression of Ll_transcript_451523

FPKM

• PAB: 0
• PNAB: 0.5
• PS1: 0.1
• PS2: 0.1
• PS3: 0
• PW1: 0.2
• PW2: 0.3
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_451523

• Blastp: DEAD-box ATP-dependent RNA helicase 3, chloroplastic from Arabidopsis with 70.76% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 3, chloroplastic from Arabidopsis with 69.91% of identity
• Eggnog: purine NTP-dependent helicase activity(COG0513)
• Kegg: Link to kegg annotations (AT5G26742)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452324.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;