Ll_transcript_451530

• Id Trinity: TRINITY_DN50634_c1_g1_i18
• Name Transcript: Ll_transcript_451530
• Sequence: TGAAAATATCTAACAACCAATATTATCCTTCACACACACCAAAACAGAGCGAGGTGGAAGTTTAAAAAGCCATACATTCATTCTCATACAAGTGCTAGCC ACCCTTATCCTCTAGCCCCTTCTTTCTCTATAAGGTTTTTTCACCTTAAACCTCTTCCCTTCACAAAATGGCTTCTATCATTGGCGTTTCTTCCATTTAC CAAACCCCTTCTCTCGAACTCCTTAAACGACAACAAACTAACCCCTCCGTTTCACTAAAACCATTGTCGTTTGACAACAAGTCTCACTTCAACACTGTTC TCAGAGCACACCTCAATAACCGAACACTTTCTGCTATTGCTACCAACAATTCTTCTGTTCTCAGTGAAGAAGCATTCAATGGCCTTGGGTTTGGTGATGT CACTGGTGACGATGATGAGTTGCGAGGATTTGATTATGAAAATGGAAATCCTTCTTCTGTTACTGTTAGTAAAGATGAACTCGATGTTTCTAAGTTGGAT TTGCCTTCCAAACTTATACAATCGCTCAATAAACGTGGAATTACTCACCTTTTTCCTATTCAGAGAGCTGTGCTATTGCCCGCACTAGAAGGTAAAGATA TTATTGCTCGGGCAAAGACTGGAACTGGAAAGACATTAGCGTTTGGAATTCCGATTCTTAAAGGCCTCAGTGATGATGACCGCAATTCTCTGAGGCGTGG TCGCCTTCCGAAAGCATTGGTCCTTGCACCTACTAGGGAGTTGGCAAAACAAGTCGAGAAAGAGATAAATGAATCTGCACCATATCTGAACACAGTTTGT GTCTATGGTGGTGTTTCCTATGTAACACAGCAAAGTTCACTATCACGTGGAGTTGATGTAGTGGTTGGTACACCTGGTAGAATAATTGACCTAATAAATG GGAACAGCCTTAAACTGAATGAAATTCAGTATTTGGTTCTTGATGAGGCTGACCGAATGCTTGCTGTTGGGTTCGAGGAGGATGTGGAAACAATTTTACA GACCGTCCCATCTGAGCGGCAGACCATGCTTTTTTCTGCAACCATGCCGGGTTGGGTGCAGAAATTGTCAAGAAAGTATTTGAACAAACCATTGACAATT GATTTGGTTGGTGACGAAGAAGAAAAGCTAGCTGAAGGGATCAAGCTTTATGCTCTGTCTGCCACCTCTACTTCAAAGAGAACAGTCCTTTCTGATCTTG TAACTGTTTATGCAAAGGGTGGCAAGACTATTGTATTTACACAGACAAAAAAAGATGCTGATGAAGTATCACTGTCCTTAACAAATATCATATCTTCTGA AGCACTGCATGGTGATATATCTCAGCATCAGAGAGAGAGAACATTGAATGGTTTTCGGCAAGGGAAATTTACAGTGCTTGTTGCCACTGATGTTGCTTCT CGTGGACTTGATATTCCCAATGTTGATTTGGTTATCCATTATGAACTTCCAAATGACCCTGAGACTTTTGTACACCGCTCTGGGCGTACAGGGCGTGCAG GAAAACTAGGTACTGCTATTCTGATGTACACCAGTAGCCAGAGGAGAACAGTTAGATCCCTTGAGCGTGATGTAGGCTGCAAATTTGAATTTATTAGTCC ACCAGCAATTGGAGAGATTTTGGAGTCATCTGCCGATCAAGTTGTTGCTACACTTAAACTTGTTCATCCCGAGTCAATTGAGTTCTTCACCCCAACTGCA GAAAAACTGTTTGAAGAACAAGGCACAAGTGCCCTTGCAGCTGCACTAGCACAGCTGAGTGGATTCTCTCGACCTCCATCATCCCGGTCTCTTATCAACC ATGAACAGGGATGGGTAACATTACAACTGACTCGAGATGGCGATAACTCTAGAAGATTTCTTTCTGCAAGATCAGTAACTGGGTTTCTTTCTGATGTTTA TTCTCCAGCTGCTGATGAAGTTGGAAAAATACACTTAATTGCAGATGAAAAGGTTCAAGGAGCAGTTTTTGATCTTCCGGAGGAGATTGCTAAAGAGTTA CTTGCTAAGGTGATACCACCAGGAAACACTATTACAAAGATCACCAAGTTGCCTCCTTTGCAAGATGATGGACCTGCAAGTGATTTCTATGGGAGGTTTT CCGACGACAGAGAACAAAGAAGTTCTAGAAATTCAAGAGGAGGTTTTAAGAGCTCACAGTCATGGGGAGGTGGACGAAACTCTGACGATGACTTTGGTAA TTCATACGGTAGAGGCGGCGGTAGAGGTTATAGATCTAGCAACAACAACAGGTCTCAAACGAGGAGAAGCAGTGGTGATGACTGGCTGATTGGAGGTAGA GGTTCAAGCAGATCTTCATCATCAAACAGAAGTAGCTATGGAGGAGGAAACTATGGAGGAGGGGCCTGTTATAATTGTGGACAAACTGGGCATAAGGCAT CAGAATGTAAGAACAGAGACTTTTTTTAGTTAGCACATCTTAAAATTTAATGCTACCTTGTCCATAACTTGAGCTGCTGCCACTGGTGATGATGGTCTAG TAGGTTCTAGAATTTGAAATATGTTTCTCTAGGGAATTACAGAATCAATGTTATTTAATTTGAAGCTCTTGGGGTTTTGGCTTTAGATGTATTACAGTCT ATACCGCTGATGTAAAATTTAAAACTTGTATTGTGGCTGTGATATTTAGCAAGAACAGTAACTCTGATCCTGTTTGTCTATTAAACGGTCTTGTTTATGA TCCTGATTAGCCTTCACATGGTTTAAAAAGGACAGGAATAGCTTTATATGCAGAATTTGTTCCCAGCTGTTGTTCATAATATTATATTCTTTATAAACTA GTTGGTCTTTGTTTATTATTTTCCATCAATTTAG
• Tissue: pods
• Gene name: LI_gene_178724;
• Additional information: details;

Expression of Ll_transcript_451530

FPKM

• PAB: 2
• PNAB: 19.6
• PS1: 10.9
• PS2: 8.9
• PS3: 9.3
• PW1: 18.4
• PW2: 11.4
• PW3: 8.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_451530

• Blastp: DEAD-box ATP-dependent RNA helicase 3, chloroplastic from Arabidopsis with 72.74% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 3, chloroplastic from Oryza sativa with 79.85% of identity
• Eggnog: purine NTP-dependent helicase activity(COG0513)
• Kegg: Link to kegg annotations (AT5G26742)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427577.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;