Ll_transcript_450908

• Id Trinity: TRINITY_DN50635_c2_g4_i1
• Name Transcript: Ll_transcript_450908
• Sequence: TATAATTATCGGTTGTATGTCGCTTCATCCTTCAATGCTTATAAGTATTTAGGCTCAAATTTTCTAACTATACTTGAATGCCCATAAGATCACCAGCCAC AATTTTTTTAGATATAACATGTGAGGGTGTTTAAAAAAAATATGTCAATTAGGAGTTCCAGTTTACATTTTGGGTAGTTGATAACACTGGTATCAAGAAG TAGAATAGAATAGGTGAAATTGAAAGGAAATGCCCCTAAACCAGAGTCAAATTGATTCTGCTAGGGTTCTAATTGAATTTTATTGATTGAGAAAGAAGAA TTACAAGAACAGAACTTGAGAGAGAAGAGAAGTAGAGAAGGAGAGAATTACAATATTTTCCCACTGATTTCCTAAATCAGTAACTACTCAATGCTTGCCT AACTTCTCTCTCTCCTAACTTCCTATTTATACTTCCTATAACTATCTACTTTTTAGAAAGTTAGTTATTCCTATTAGAGCCATGCTGGCGCCTCTTATAC ACTTTTGTGATAGGAGGTCTAGGCCTCCTTTTAATTCTATCTGTAGTGTTGGAAAACAAAGAATTATCTGTCTGAGTTAACTTTTCACGCATTTATCATG AAGGTCTCGCTCTGCCATATGGCATGCCAAGTTGGTGATAGAAATGCAGGCGTGGACAAAGTCACCTTTCTTTACCGGCTGACCCCTGGTGCATGCCCAA AGAGCTATGGTATTAATGTTGCCCGGTTAGCTGG
• Tissue: pods
• Gene name: LI_gene_178732;
• Additional information: -

Expression of Ll_transcript_450908

FPKM

• PAB: 0.1
• PNAB: 0.5
• PS1: 0.2
• PS2: 0
• PS3: 0.2
• PW1: 0
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_450908

• Blastp: -
• Blastx: DNA mismatch repair protein MSH6 from Arabidopsis with 81.82% of identity
• Eggnog: that it carries out the mismatch recognition step. This protein has a weak ATPase activity (By similarity)(COG0249)
• Kegg: Link to kegg annotations (AT4G02070)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419556.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;