Ll_transcript_449712

• Id Trinity: TRINITY_DN50637_c2_g1_i2
• Name Transcript: Ll_transcript_449712
• Sequence: CTCACTCCACTAGTGTATAGAGAGAATATCAAAGTGAAGAAAAATAAGAAGAAGAAGAAGAAGATAAGAATATGACAGGAACTGTGATAGTAAGCATGAA TGGTGCATGTGGAAAAGGAAGAAGAGTTACTAAAACAACTGAATATGAAGAAGTTGAAGAAGAACAGAATCAGGTTTCTCCGGTGGCGGTTTTGTTAGCG GCGTTGAGAAAATCTATGGTGGCGTGTAGTGTGGAAAGTCCTAACGATGTAATCTCCACCGTTCATCATCATCATAAAATGGAGATTGGATGGCCCACAA ATGTTAAACATGTTAGTCATGTTACTTTTGATCGTTTCAATGGCTTTTTGGGTCTTCCCATTGAGCTTGAGTTGGATATACCTTCTCCAGTTCCTAGTGC TAGTGTAAGTGTGTTTGGGGTCTCAGCAGAATCAATGCAGTGTTCTTATGATTCAAAAGGAAACAGTGTCCCCACTATTCTCTTACTAATGCAAGAGAGA TTATACTCACAGGAAGGACTAAAGGCTGAAGGTATATTTCGCATAAACCCGGAAAACGGCCAAGAGGAGCATCTGAGAGACCAGTTGAATAAGGGCATTG TGCCAGATAACATTGATGTACATTGCTTGGCAGGCCTGATTAAAGCGTGGTTTCGAGAGCTTCCTTCGGGAGTGCTCGATGGACTTTCGCCTGAGCAAGT TCTTCACTGCAATACTGAAGACGAATCTGTTCAACTTGTGAAGATGCTAAAGCCAACTGAATCTGCCTTGCTCAATTGGGCCATTGATCTCATGACTGAT GTTGTAGTAGAAGAGGAGTATAACAAAATGGATGCAAGAAATATTGCAATGGTTTTCGCCCCGAATATGACTCAGATGTCTGATCCACTAACTGCGCTGA TGCATGCGGTCCAAGTGATGAATTTACTGAAGACTCTGATACTGAAGACACTACGAGAACGTGAAGAAACAACGACATCGGGATATTCATCTATGTCATG CCATTCATCATATCACCAATCCGAAGATGAGTATGACAGTCAGCAAGAAATGGATACTAGTGGCGAATTGATAAGGACCAAGTCGGATTATGACGATGAT CATGTTCACTACAACCATACTAGTGAAGAGGAAGGTGAGGCTGCATCTATAAGTGAGATTGAGGAATGCTTCTTGAAGACTTTGGATGAGAACACAACAA AATTCTCAGAAGAACCTGCAGGGTGTTTACAAGAGGAGCTTGCAGCCAGAACTAGACATTGCTCAAGCCATAACATGGAATCTGATATATCATTCACTGA AAATCCGTGCTCGAGTTCGTCTTGCCGAGATGAATCTAGAGCAACTCCAGTCGATATGTCGTCAAATGTTGGTACAAGTAGTTAGTTGATGAAGTGGAGA AAATCGATAAATTTACGCATTATGTTTCCTTAGTTCCACAGCTTGCATCTAGTACAGGCATACATTCTGTTTCATTGATTCCACTGTTTGCATTGCATCT AGTTAAAAACTAAGTTTCTCTAAGAATGCTTAAGTATGTTGTTTTATAGTTTTTGTTTTACAAGCAAGGGTTGCTTGTGTAAATTAATACATGAAGGTAG AAGTGTTTGCTTCAGGTTATGTTCAGTTTAGGGCTGAATTTTGACCTGGTTCTGTATGTTACAGTAGTGGACAAATTATAACTGTGACAAATGGATATGG CTATCTACTATTAAGGAGTAATAGCTATCTATATTTTTAGATTTCACTTAGGTGGAAGATTTTTATGTACTATGTATTGCTATGTATGCTATGTAATGTG TGTGATCAATATTTGATTTGAAGTTTGGTTGAATGAAAACATTTAAAATACAATTCATGAAGGTCAACTATGTATTCTATATGATTAAATTTCAG
• Tissue: pods
• Gene name: LI_gene_178749;
• Additional information: details;

Expression of Ll_transcript_449712

FPKM

• PAB: 0.2
• PNAB: 21.3
• PS1: 21.1
• PS2: 5.2
• PS3: 14.2
• PW1: 8
• PW2: 4.6
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_449712

• Blastp: Rho GTPase-activating protein 2 from Arabidopsis with 66.94% of identity
• Blastx: Rho GTPase-activating protein 2 from Arabidopsis with 73.72% of identity
• Eggnog: rho GTPase activating protein(ENOG410XRR2)
• Kegg: Link to kegg annotations (AT4G03100)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_003521525.1)
• Pfam: P21-Rho-binding domain (PF00786.27)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;