Ll_transcript_449713

• Id Trinity: TRINITY_DN50637_c2_g1_i3
• Name Transcript: Ll_transcript_449713
• Sequence: GGATATATAGAGAGAGAAACACAAAGAGAGTTAGAGAGAGAGAGAGAGAGAGAAACGATGTCGGGGCTCGTGGTGGTGACAAAGGGCGGTGGTTGCGGCC GTAGGAAGAGGTCCAGATCGGTTAGAACCGCCGAGGAAGAAGAACAACAACAGAGCCAGCTGTCACTAGTTGCATTGCTATTAGCGGCGCTGAGAAAATC TATGGTGTCTTGTAAAGTTGACAGACCTGACGATGTAATCTCCACCGTTCATCAGATGGAGATCGGATGGCCCACAAATGTTCAGCACATAACTCATGTT ACCTTTGATCGCTTCAATGGCTTTCTGGGTCTTCCACTTGAGTTTGAAGTTGAGATCCCGGGTCGGGTTCCCAGTGCTAGTGTAAGTGTATTTGGCGTCT CAGCTGAATCCATGCAGTGTTCTTATGACTCAAAAGGAAACAGTGTCCCAACTATTCTCTTGCTAATGCAGGACCGTTTATACTCACAAGGTGGCTTAAA GGCTGAAGGTATATTTCGCATAAACCCGGAAAATAGTCAAGAGGAGCATGTGAGGGACCAATTGAATAGGGGCATTGTGCCAGATGACATTGAAGTCCAC TGTTTGGCAGGTCTAATTAAAGCCTGGTTCCGAGAGCTTCCTTCAGGTGTGCTAGATGGACTTTCCCCTGAGCGAGTTCTTCAGTGCAACACAGAAGAAG ATTCTGTAGAGCTTGTGAAGCAGCTAAAGCCAACGGAGTCTGCCCTGCTCAGCTGGGCTATTGATCTCATGGCTGACGTTGTAGAAGAAGAGGAGTATAA CAAAATGAATGCAAGAAACATTGCAATGGTTTTTGCTCCAAACATGACTCAGATGTCTGATCCACTAACCGCTCTGATGCATGCGGTTCAAGTGATGAAC TTACTCAAGACACTGATAATGAAGACACTTAGAGAACGTGAGGAAACCGCCACAACAGGAGGATATTCACCTATGTCATTTCATTCATCAGATCGCCAAT CTGAGGATGAATATGACAGTCGGCAAGAAATGGACACCAGCGGAGAATTTAGAGATGAGAACAAGTCAGATTATGATGATAATGCTCATTGCAGCGATAA CAGTGAAGAGGAAACTGAGGTTGAACCTTTAAGTGAAATAGAGGAATGCTTCTTGGAGCAATTGGATGAGATCACACAAGAGTTCTCAGAACCTGCAGTT TATTTGCAAGAGTATGCGAGCCCCAGAAGTTACTCTGCCCATAGCATGGAATCTATATCCATCACTGATAGCAAAACTGCGAATTCTTGTCCGAGTTCCG CGGATGGAGGAAACTTTCGGACAACACTGACTACAGTGAACTCAAAGGTTGACACAAGCAGTCCACTAGTAGGATGTACAAGCACAAATGGTGTGGAGAT GATAGACAAAATTACAGATTCGGTTTCATCAATGTCGCGACTTGCATCTAGTTAACAGCTGGGTTCCTTTTCAGCACTTAGCACCTCGTTTCGGATTTTG ACTATATAAGCATATGCTTGCTTGTGTAAATTAATAGATGGGGTAGGGACTTTTTGCTTGTTGTGGGTGGTTATGTTCAATTTATGGGCTGAATTTGACC TGGTTCTGTATATGTAGTACTAGACAAATATAACCATGTCAAATGGAAAATGGGCTAAAGGAGTGGCCACACCTTAGAATTTCACTTAGATGAATGTTCT AATGATTGATGGAATTGTTGAGAATAGGGGTATTTGTTTAGCCTGAGATGGTTCTTGCTATGTAAAGTATGACATATTTTGAGTTGGGATATTCCTTCTA TTTCCTTCTTGGGATAAGGATTTGAATGGACATGTAGTTTTTCCATTGTAGAGGAGGGTGTGACATCAATTTATTATCATAGGTGGAAGGTCTCTTTAAA CCATGGAGGCAATCCCATCACCAAGAGGCAGTGTGGCTCTTTATGCATGAGATGATTTGTTGCAACCTTGTGATTCCTTTCCATTTCAAATGCATTGAAA TGATTTCCCGTTGAAACGGGCTACTCGGAATGGTTTGGGCTAACCTATATTGGGTTTGGGCTAAATTGGTCCGAGCGAAAAAGTTCGGATACAATTTATG TATATCAAATTGTATTACAAACCAGCCCTAAGTAGGTTGTGGCAGA
• Tissue: pods
• Gene name: LI_gene_178749;
• Additional information: details;

Expression of Ll_transcript_449713

FPKM

• PAB: 7.9
• PNAB: 21.9
• PS1: 11.8
• PS2: 4.8
• PS3: 7.8
• PW1: 12.8
• PW2: 8.4
• PW3: 1.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_449713

• Blastp: Rho GTPase-activating protein 2 from Arabidopsis with 66.58% of identity
• Blastx: Rho GTPase-activating protein 2 from Arabidopsis with 80.55% of identity
• Eggnog: rho GTPase activating protein(ENOG410XRR2)
• Kegg: Link to kegg annotations (AT4G03100)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452647.1)
• Pfam: P21-Rho-binding domain (PF00786.27)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;