| Id Trinity | TRINITY_DN50637_c2_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_449716 |
| Sequence | GGATATATAGAGAGAGAAACACAAAGAGAGTTAGAGAGAGAGAGAGAGAGAGAAACGATGTCGGGGCTCGTGGTGGTGACAAAGGGCGGTGGTTGCGGCC GTAGGAAGAGGTCCAGATCGGTTAGAACCGCCGAGGAAGAAGAACAACAACAGAGCCAGCTGTCACTAGTTGCATTGCTATTAGCGGCGCTGAGAAAATC TATGGTGTCTTGTAAAGTTGACAGACCTGACGATGTAATCTCCACCGTTCATCAGATGGAGATCGGATGGCCCACAAATGTTCAGCACATAACTCATGTT ACCTTTGATCGCTTCAATGGCTTTCTGGGTCTTCCACTTGAGTTTGAAGTTGAGATCCCGGGTCGGGTTCCCAGTGCTAGTGTAAGTGTATTTGGCGTCT CAGCTGAATCCATGCAGTGTTCTTATGACTCAAAAGGAAACAGTGTCCCAACTATTCTCTTGCTAATGCAGGACCGTTTATACTCACAAGGTGGCTTAAA GGCTGAAGGTATATTTCGCATAAACCCGGAAAATAGTCAAGAGGAGCATGTGAGGGACCAATTGAATAGGGGCATTGTGCCAGATGACATTGAAGTCCAC TGTTTGGCAGGTCTAATTAAAGCCTGGTTCCGAGAGCTTCCTTCAGGTGTGCTAGATGGACTTTCCCCTGAGCGAGTTCTTCAGTGCAACACAGAAGAAG ATTCTGTAGAGCTTGTGAAGCAGCTAAAGCCAACGGAGTCTGCCCTGCTCAGCTGGGCTATTGATCTCATGGCTGACGTTGTAGAAGAAGAGGAGTATAA CAAAATGAATGCAAGAAACATTGCAATGGTTTTTGCTCCAAACATGACTCAGGTATGCTCATCCATTCATTGTCTGTTAAAATTATTAATATTTGCTTAA CTCATGTACTTGTATGTTATCTTTTGTTAACCTCTTCCTTTGTTTCGGGTAAATGATTTTCATTTTCCCCCCACTTAATAAGCTATCATCAATTCGTTAT TATCTTCTTTCAATAAGCAATCTGCAAAAATCATTACCAAGCAAGTTGTAATGCTATATTGTTATAGTAGCACGTAGAAATCAACTGGCTATTACTCTTA TGCACAAGAGAACTATACACACTAGTTAAATGTCTATTTATATTTCATATTTTCATCCTTGTCTGCTAAAACAGATGTCTGATCCACTAACCGCTCTGAT GCATGCGGTTCAAGTGATGAACTTACTCAAGACACTGATAATGAAGACACTTAGAGAACGTGAGGAAACCGCCACAACAGGAGGATATTCACCTATGTCA TTTCATTCATCAGATCGCCAATCTGAGGATGAATATGACAGTCGGCAAGAAATGGACACCAGCGGAGAATTTAGAGATGAGAACAAGTCAGATTATGATG ATAATGCTCATTGCAGCGATAACAGTGAAGAGGAAACTGAGGTTGAACCTTTAAGTGAAATAGAGGAATGCTTCTTGGAGCAATTGGATGAGATCACACA AGAGTTCTCAGAACCTGCAGTTTATTTGCAAGAGTATGCGAGCCCCAGAAGTTACTCTGCCCATAGCATGGAATCTATATCCATCACTGATAGCAAAACT GCGAATTCTTGTCCGAGTTCCGCGGATGGAGGAAACTTTCGGACAACACTGACTACAGTGAACTCAAAGGTTGACACAAGCAGTCCACTAGTAGGATGTA CAAGCACAAATGGTGTGGAGATGATAGACAAAATTACAGATTCGGTTTCATCAATGTCGCGACTTGCATCTAGTTAACAGCTGGGTTCCTTTTCAGCACT TAGCACCTCGTTTCGGATTTTGACTATATAAGCATATGCTTGCTTGTGTAAATTAATAGATGGGGTAGGGACTTTTTGCTTGTTGTGGGTGGTTATGTTC AATTTATGGGCTGAATTTGACCTGGTTCTGTATATGTAGTACTAGACAAATATAACCATGTCAAATGGAAAATGGGCTAAAGGAGTGGCCACACCTTAGA ATTTCACTTAGATGAATGTTCTAATGATTGATGGAATTGTTGAGAATAGGGGTATTTGTTTAGCCTGAGATGGTTCTTGCTATGTAAAGTATGACATATT TTGAGTTGGGATATTCCTTCTATTTCCTTCTTGGGATAAGGATTTGAATGGACATGTAGTTTTTCCATTGTAGAGGAGGGTGTGACATCAATTTATTATC ATAGGTGGAAGGTCTCTTTAAACCATGGAGGCAATCCCATCACCAAGAGGCAGTGTGGCTCTTTATGCATGAGATGATTTGTTGCAACCTTGTGATTCCT TTCCATTTCAAATGCATTGAAATGATTTCCCGTTGAAACGGGCTACTCGGAATGGTTTGGGCTAACCTATATTGGGTTTGGGCTAAATTGGTCCGAGCGA AAAAGTTCGGATACAATTTATGTATATCAAATTGTATTACAAACCAGCCCTAAGTAGGTTGTGGCAGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_178749; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_449716
| Blastp | Rho GTPase-activating protein 2 from Arabidopsis with 81.78% of identity |
|---|---|
| Blastx | Rho GTPase-activating protein 2 from Arabidopsis with 82.2% of identity |
| Eggnog | rho GTPase activating protein(ENOG410XRR2) |
| Kegg | Link to kegg annotations (AT4G03100) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452647.1) |
| Pfam | P21-Rho-binding domain (PF00786.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |