Ll_transcript_450342

• Id Trinity: TRINITY_DN50641_c6_g1_i5
• Name Transcript: Ll_transcript_450342
• Sequence: GAATTGTGACGCTCTTAGCGCCACACTCTTATAAATTAGGGTTTTGATTTTCTCACTCCTCTTTTCCTTTTACTCAAACTAGCGTCACAACCTTTTTCTT CATAGTGTCTATGGCGAAAGCTTCTTCTGGAACCGTTAATCCACATGTTCGGAATGGAGTTCGAATTGTTGTTGCCGGAGATCAAGGAACTGGAAAATCT AGCCTCATCATCACTGCCGCTGCTGAAAATTTCCCTCTTAATGTTCCGCCGGTGTTGCCGCCCACTAAGTTGCCGGAGGATATATATCCCGATCATGTGC CAATCACAATCATTGACACATCTTCCCGTGCTGAGGACAGTGATAAAGTTACTGAAGAATTGCAGCGGGCTGACGCAGTTGTCCTCACTTATGCGTGTGA TCGCCCTGAGACACTTGAAAATCTGAGTACATTTTGGCTCCCACATCTCCGGAAATTAGAGGTAAAGGTCCCAGTTATAGTGGTTGGTTGTAAGCTTGAT TTGAGAGATGAAAATCAGCAGGTGAGCCTAGAACTGGTGATGTCACCAATAATGCAACAGTTCCGAGAAATTGAAACTTGCATCGAGTGTTCAGCATCCA GGCATATCCAGGTCCCTGAAGTCTTCTACTATGCACAAAAGGCCGTTCTTCATCCAACAGCTCCATTATTTGATCAGGAGTCGCAGACTCTAAAGCCTCG ATGTGTGCGGGCATTGAAGCGGATTTTTATCCTTTGTGACCATGACAGAGATGGTGCCCTTAGTGATGCTGAGCTGAATGATTTTCAGGTTAAATGTTTC AATGCACCTTTGCAACCATCTGAAATTGTGGGTGTAAAGAAGGTTGTACAAGAAAAGTTGTCTGAAGGTGTCAATGAGCGTGGGCTTACATTGACAGGAT TCCTTTTTCTTCATGCCCTTTTCATAGAAAAGGGGCGTCTTGAGACAACATGGACTGTGCTCAGGAAGTTCGGATATAATGACGAAATCAAGCTTGCTGA TGATCTAATTCCACCTTTGAAACGGGCTCCCGGTCAGAGTGTGGAGTTGACAAATGAAGCACTTGATTTCTTGAAGGCAATCTTTGATGCTTTTGATGGT GATGGGGATGGGATGTTGCGACCTCGTGAACTCGAGGAATTGTTTTCTACCGCCCCAGAAAGTCCTTGGACTGGAGCTCCATATGAGGATGCTGCAGAAA AAAATGCATTTGGAGGACTATCACTTGATGCGTTTTTGTCAGAGTGGGCACTTATGACACTTCTGAACCCAAGTTTTAGTGTGGAAAATCTGATATACAT TGGTTACACTGGTGATCCTTCATCTGCTATTCGTGTGACTAGACGGAGGCATTTAGATCGCAAGAAGCAACATTCAGAAAGAAATGTTTTGCAGTGCTTT GTTTTTGGGCCTAGGAATGCCGGAAAATCTGCCTTGTTGAATTCTTTTATTGGAAGACCATATTCTGAAAATTCCAATCCAACCACCGAGGATCGTTATG CTGTAAATGTTGTTGATATTTCTATGGAAAACAAAAAATTTCTTGTACTGAGAGAGATTCCCGAAGATGGAGTTAAAGCTCTGCTGTCCGATAAGGAATC TTTAGCCTCATGTGACATAGCTGTTTTTGTTCATGACAGGTCCGATGAGTCCTCGTGGAGGGCGTCATCTGAGCTGCTGGTGGAAATCGCAGGTCATGGA GAAGATACTGGCTTTGAGGTGCCCTGCCTTATAGTTGCAGCTAAAGATGATCAGGATTCTTTTCCAATGGCTATACAAGAGTCAACTAGGGTATTTTTTA TTGGCTTATTTCTTTGCATGATTGTATGCGTAGTCAAGTTTGCATTTTGTTGTTCTTGTGATTTTGTTACATGCTTAACATTTTCAAATTCTTGGATGGT TAGAAAATAAATCTATTTGACGTGGTGATAAGACGTGTGTTGATGAAATAATAGCAAGTAGTAGTGTATGTATGTATATATTTTGTCCTTGTAATGAAAT TTGATTAAGCAACTTAGAAATCAAAAAAGAAGTCCAATTTGATTTTTGTTGTTTCATTTTTTATATAAGAGTTGTGTCGTGACACTTTTTATATATTTTT TTCTAGTTTTATTTTGATAATTTACTTGGACTATGAAGTTATGGACGGAGATAATTGAACGGACGTTGAGACAATAGATAAGCTTCAGAAGCACATATCT TTTGTATTAGTCAAAATAAGATGAAGTATATGGAGTGTAAGTTTAGCAAGAGGGGAACTAGCCTGATGTATTTCATTTGGAATTTTCAGATTTTCATCTC CAAATCCTATATTAGAATTGACTCGAGAAGACAAATAAGGCATTGGGTTAATTTTCTATATTAGTGAAGGAGATAGTATTTGTAGCATAAGAAGGTTAAG CAATCTAGCTTGTATGGTCTAAAGTTGAGAAAAGAAAAAAAAACTAATAAAGCTAACTTACCAACCAAATACTCATTCCAAAAGGAAGTTTAATCATGCC CATTTTGTAGATTATCTTTGTGTGGTTTCACCATTCTGTTGAGCTTCATACTGGACTGCTCTGCTGCATAATCATATAGTTTTCTTGTCATGTGCTGTGT GAATAATGGGCAGTCAAACATAGCCCTGAGAGTGTAATTGTAACAATTACCAAATGTACATGATTCTGGGAAAAATGTTCAAGAAACTGTTTCATCCTTG ATCAACAGCAATGACACTTTTGACTTGCCATTGTGTTTTCAGCTTAGTCAGGATATGGGAGTAGAGGCTCCTATCCCAATAAGTGTCAAGTTAGGGGATT TCAACAGTCTGTTCCGCCGTATTGTAACTGCTGCCGAGCATCCTCATTTAAGCATTCCAGAAACTGAAGCTGGGAGAAGTCGCAAGCAATACCACAGGCT TATAAATCGTTCTCTCATGGTTGTTTCAGATTGTTCGAGCATGGGGTTTAAGGATTAGCGATGCAATCAATTATCAGCAATATCAAAGTGTAGAAGATTA GTAAATACACGAGTTACTAAGGTTATGCATTCTGATGATGTGATTGTCGTGATTTAGATGTTCTTTGTCGCTTGTTTAGTTGTCCACTTCGATTTTAAAG GTTTTTGGTATGTTGTTTCATAATCATGAGGTATTTTGCAACTGTGATGCACAGGTCTTTACACTCATTAAGCTTCTTATTGCCATCTTACCTATATGTG AATCTTTTTTATTTTTGTTTGGGGTAAAATAATGAGTTTTGGACCTATCATTAACCTTTGTCCTAGTGGCTTACCTTTATCTGAATCTTGTTATTTTCAT TTTTCACTCTCAGTTTCCGTTTCACATTTTTCTTGGCTTACCTTGATCTTGTTTCATATTGTTCGAGCATGGGGTTTAAG
• Tissue: pods
• Gene name: LI_gene_178801;
• Additional information: details;

Expression of Ll_transcript_450342

FPKM

• PAB: 0.2
• PNAB: 0.7
• PS1: 1.1
• PS2: 0.6
• PS3: 1
• PW1: 0.6
• PW2: 0.9
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_450342

• Blastp: Mitochondrial Rho GTPase 1 from Arabidopsis with 73.4% of identity
• Blastx: Mitochondrial Rho GTPase 1 from Arabidopsis with 73.4% of identity
• Eggnog: Mitochondrial GTPase involved in mitochondrial trafficking (By similarity)(ENOG410XRHW)
• Kegg: Link to kegg annotations (AT5G27540)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452250.1)
• Pfam: Ras family (PF00071.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;