Ll_transcript_448917

• Id Trinity: TRINITY_DN50646_c0_g1_i5
• Name Transcript: Ll_transcript_448917
• Sequence: CACTCTTTTCTCCTCCTCCTCCAAAAAATGACGCAACCACCGTTTCCGCCGTCCAAAATCTCCTGCGCCGGTTGCCAATCGGTCCTCGACGCGCCGCCGC CGGACGTGGTAGACTTCACTTGTCCTCTCTGTCTAATGCGGCAGAGAATACCTCCGGTAGGATCAAAAACCAAGGCTCGCAAATCGCACGGCGTTGATGC CGCCGCTAAGACGAAGGTTCCGTGTACTAACTGCACCACCGTTTTCAATGTGCCTATTGGCCTTGCGAAATTCGCTTGCCCTAACTGCGCGCTTGAGATC ACAGTCAACGTCGTCGAAGAAGTCAACGAGCTAGCGGTTGAAGTGGAGCGGGATGAGGATGAAGGTGGTGTGGCTGGAGAAACATTTACGGATTATCGAC CAGCAAAAGTATCTTTTGGACCTCCACACCCAGATTCTGTTGTGGAGACATCTTCCTTGTCTGCAGTGCAGCCACCTGAGCCTACTTATGATCCAATAAC TAAAGTTGATTTGGAAATTTCAAAGGCTTTGTCATGCTTGCAAATAGAGACTTTGGTCTATGCTTGTCAGAGACACCTTCAACACCTCCCTGACGGTTCT AGGGCAGGTTTCTTTATAGGAGATGGTGCTGGTGTAGGTAAAGGTCGAACAATTGCAGGGCTAATTTGGGAGAACTGGCACCATGGAAGGAGAAAAGCTT TGTGGATTTCTGTTGGTTCAGACTTGAAGTTTGATGCCAGAAGAGACTTAGATGATATTGGTGCAAATTGTGTTCAAGTGCATGCTTTGAATAAACTGCC TTATTCTAAGCTTGACACAAAGTCTGTTGGGGTCAAGGAGGGAGTTGTTTTCTTGACATACAGTAGTCTCATAGCATCTTCTGAGAAAGGTTCTTCTCGT CTCCAACAACTTGTGCGGTGGTGTGGGCCACAGTTTGATGGTCTTATAATTTTTGATGAGTGTCACAAAGCCAAGAATCTGGTACCTGAATGTGGTAAAC AGCCAACACGTACTGGTGAAGCAGTGCTTCATATCCAGGCTCAACTACCCGAAGCTCGTGTTGTATATTGCTCAGCCACTGGTGCATCTGAATCCCGTAA TATGGCTTATATGGTTCGACTTGGTCTTTGGGGAGCTGGTACTTCGTTCAATGATTTCAGTGAATTTCTAGGTGCTCTTGAAAGAGGTGGTGTTGGAGCT CTAGAACTAGTTGCCATGGACATGAAAGCAAGGGGGATGTATTTATGTCGGACGCTAAGTTACAGTGGTGCTGAGTTTGAAGTTATTGAAGCCCCATTAG AAGATGAAATGATGGACATGTATGAAAAGGCTGCCGAGTTTTGGGTGGAATTGCATGCAAAACTGCTGTCAGCCATTAACAACCCACTGGTGAAACTTAA ATGTCGTCATCTATTGGCATTATACTGGGCAAGCCACCAGCGTTTTTTTAGACACATGTGTATGTCTGCTAAAGTCCCGGCTGCTGTGAGATTAGTGAAG CAAGCATTAATGGAAGATAAGTGTGCAGTAATTGGTCTGCAAAGCACTGGGGAAGCAAGAACAGAAGAAGCTGTGGCAAAATATGGCTCTGAACTTGATG ACTTTCTTTCTGGACCTCGAGAATTGTTGCTAAAGTTCGTAGAAGAATATTACCCGTTGCCAGAAAAGCCCGAGCTTCTCCCTGTAGAAGATGATGTAAA AGAGCTTCAGAGGAAGAGGCACTCAACAGGTCCTGATGCTTCAGCAAGAGGAAGGGTCCGAAAAGTAGCTAAGTCGGAGCCTCTAAGTGATATTGAAAGT GAAGAATCTGAAATTGCCTCTGATCTTGAATCGGCTGAATCTGATTATGAACCAGAAGGGGAAGCTGCCTCTGCTATTGAATCATCTGACTCTGATTACG ATGAGCTTCAGATGTGTCAAATTTGCAGTACTGAGGAGGAAATGGAAAATTTGTTGCAGTGTTCTTCCTGTGGTAAACTTGTCCATCAAGCATGCTTGTT GATGCCTCCAGTTGGCCATTTGGTTCCTGAAGTATGGTCATGCCATATGTGCATGGAAAAAGAAAAACCAGATGATCTAAAAGCAAGACAAGCCTATCTA ACTGAAATGCAGGAGAGGTATGATACAGCCTTGGAGTGTAAGACAAAAATAATAGAGGCCATTCATTCCTTGAATCTTCCAAATAATCCCTTGGATGATA TTATTGACCAGTTAGGAGGCCCTGACAAAGTTGCAGAAATAACTGGAAGGAAAGGCATGCTTGTGAGGGACCCTAGTGGAAAGGGTGTAAATTACAGGGC TCGTAACACAAAGGATGTCACTAAGGAGATGGTCAACATGCATGAAAAGCAGCTCTTTATGGATGCTAAGAAGTTAGTTGCTATTATCTCCGAAGCTGGA TCAGCTGGTGTTTCTTTACAGGCAGATAGAAGAGCGATAAATCAGAAAAGGAGGATCCATATAACTTTAGAGCTTCCATGGAGTGCTGATCGAGCAATTC AGCAGTTTGGAAGAACTCATCGCTCAAATCAAGCTTCAGCGCCACAATACAGGTTACTCTTTACAGACCTTGGTGGAGAGCGAAGGTTTGCATCAGTTAT TGCTAAGAGATTAGAATCTCTTGGTGCTTTGACTCAGGGGGACCGTAGGGCAGGACCTTCATTAAGTGCTTATAATTATGATACTACTTATGGAAAGAGG GCTTTGATGATTATGTACAGAGGAATAATGGAGCAGGATTCTCTTCCTGTTGTACCTCCGGGATGTTTACCTGACAAGCCAGAAATGATTCATGATTTTA TTACGCAAGCAAAATCTGCTCTTGTACTAGTTGGAATAATTAAGGACCCAATTCATGATTCTGGAAGGATATGTGGCCACATTACTGATTCAGACATGCA AGATGTTGGGCGATTCCTCAACCGGGTTTTGGGGCTAGCTCCTGGGATTCAGAATAGGCTATTTGAGTTATTTGTGAGTATCTTGGATCGTCTCATTCAA AATGCTCGCATTGAGGGTAACTTGGACACCGGCATTGTTGACATGAATGCTAATGTCATTGAACTAAAAGGATCTCCAAAGATTGTCCATGTTGATCAAG TGACTGGGGCTTCAACTGTTCTGTTCACATTCATTTTCGATCGTGGGACTACATGGGAGCTGGCAAATACCATTCTGAATGAGAAGCAGAAAGATACCAA TGATGGTTTCTATGAGTCAAGGAGGGAGTGGATGGGAAGGCGCCATTTCATTGTAGCACTTGAAAGTTCTGCTTCAGGTTTCTATAAGATAATTCGCCCT GCAGTTGGAGAATCACTTCGGGAGATGCATCTGGCAGAATTAAAAAGTAAATATAGAAAACTTTCATCTTCAAAAAATGCTCAAATTGGTTGGGAAGACG AATATGAAGTTTCTTGTAAACAGTGCATGCATGGTCCGAAATGTAAGCTTCGCAACTTCTGTACAGTCGGCCGAAGACTACAGGAAGTAAATGTCTTGGG TGGCCTCATTCTTCCTCTTTGGGGAAACATAGAATCGGCCTTCTCTAAACAGGCCCGCCTAAGCCATAGGAGGCTCCGTGTTGTTCGCATAGAAACTACT TCGGATAACCAACATATAGTTGGGCTTCTTGTTCCTAATGCAGCAGTTGATACCGTGCTTAAAGGTTTGGTTCAAGAAATAGATGGTTGACCTTAGAACA AGACTTATAACACTTTTGTTTCCTTGCAAAGTGGCAAGTAGATGCTGCCTTAATATCTGGTGGTTTTCAAAGTATACAAGCAGTATTTGTTTTTTGGTAC ATGCCCCAACCTTGTTGCTGAATATTTTGCCTTGCAAAGCAATTGTGCAGTCTCATTTTTGATTATTTTGATTTATCACCCATTGGTGCATATAATTCAA TATTGTATGTTTGTAAAAGTGACCACTGATAATGAAACACTTTTGATGGCTCACTTATTGTGCTATACTTATGAATGGAACCTATGATTGGGATCCGATT AATATATAAAACCTTATACACTTTCA
• Tissue: pods
• Gene name: LI_gene_178827;
• Additional information: details;

Expression of Ll_transcript_448917

FPKM

• PAB: 0.1
• PNAB: 1.8
• PS1: 1.7
• PS2: 0.2
• PS3: 0.6
• PW1: 0.8
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_448917

• Blastp: Protein FORGETTER 1 from Arabidopsis with 66.12% of identity
• Blastx: Protein FORGETTER 1 from Arabidopsis with 71.3% of identity
• Eggnog: Strawberry notch homolog(ENOG410XQ7Q)
• Kegg: Link to kegg annotations (AT1G79350)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425699.1)
• Pfam: P-loop containing NTP hydrolase pore-1 (PF13872.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;