| Id Trinity | TRINITY_DN50646_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_448920 |
| Sequence | ATGCTCATTCTCCTGGAAGAGTGGCAAAGTTTCAAATGTTACTTGTTCTGTTTTTAAAAATAGTACTCTGATTTATGTTGAGCTTCTTGTTTCATCATGG CAAAGTTATATTTGGTTTTATTATTCAGTAATTTGTATCATGTGTAATCCTCTAATTTTTTATTTTATAAGTAGTAATATTTGGCAAAACCTAAAACATT CTGCAATCTGCAAAGTAGGCGCTGTCTAATGCAGTAAGAAAGATAGCAGATATCAGATCTAGCATGTCAACTTGGACATAACTTGTAGCATTATTAGTTC AAAGAGGACAACGGAAGATGATATTTATTCTCACAATTTATTATTCTGCATAAGCAACTTGTAAATTCTTTCCCTGTATTTTTTCTCATTATTGTTTTCT TTCATTGCCTCCTTTTATGCTTCTTTTTCTACTGGCCTGTGTTCAACTCATTAGCTTTCTGATGCATTCTGTTAATTCAGCTGATGATCTAAGCCAAGCT GCTTGACCAATCAGGTTGTAATTAGATAAACTACTAGTACCTTCAGACAGAAAGTGGCTAACATAAAATGCAATATAATAAAAACAATTAGTCATTAAAT ATACTGTTCAGTGCTGATTCATCAACATTCACATGACACCAACATAAAAGGCAAGCACGGTGTGATGCAACCTATTAGATAAACTAGCAGAAGTTGCCTA TCAGGTTGTAATAATTAATCAGTTTGTTTCGTTACCTAGCAGGTTGTAATTAGATAAACTACTAGTACCTTCAGTTGCGTCTAAAGAATGCCAGTGGTTG ATGTGTTAGGTAATAGAAGTAATTGTCAAAGTTGTTTGAAAGTTGAATGTTGATGATGCTCTTTCATAGCAAATGCTGTGCAAGATGTCTTTCTCAAACT TATCCATGCAACATCAACCATATAAAATTGGTTTCCGTCAATATAATATATGATTTGATATTATTTTAAGCTTTTTCCTAACAGCAAATTTTGGCTTTTG ACAAACCTCTTCTCAGTCTCTACATTGGTCTAATGTATGTTGTCTAGCTCTATGTGAATAAATGTTCATGTTTGTTGACAGGCTCAACTACCCGAAGCTC GTGTTGTATATTGCTCAGCCACTGGTGCATCTGAATCCCGTAATATGGCTTATATGGTTCGACTTGGTCTTTGGGGAGCTGGTACTTCGTTCAATGATTT CAGTGAATTTCTAGGTGCTCTTGAAAGAGGTGGTGTTGGAGCTCTAGAACTAGTTGCCATGGACATGAAAGCAAGGGGGATGTATTTATGTCGGACGCTA AGTTACAGTGGTGCTGAGTTTGAAGTTATTGAAGCCCCATTAGAAGATGAAATGATGGACATGTATGAAAAGGCTGCCGAGTTTTGGGTGGAATTGCATG CAAAACTGCTGTCAGCCATTAACAACCCACTGGTGAAACTTAAATGTCGTCATCTATTGGCATTATACTGGGCAAGCCACCAGCGTTTTTTTAGACACAT GTGTATGTCTGCTAAAGTCCCGGCTGCTGTGAGATTAGTGAAGCAAGCATTAATGGAAGATAAGTGTGCAGTAATTGGTCTGCAAAGCACTGGGGAAGCA AGAACAGAAGAAGCTGTGGCAAAATATGGCTCTGAACTTGATGACTTTCTTTCTGGACCTCGAGAATTGTTGCTAAAGTTCGTAGAAGAATATTACCCGT TGCCAGAAAAGCCCGAGCTTCTCCCTGTAGAAGATGATGTAAAAGAGCTTCAGAGGAAGAGGCACTCAACAGGTCCTGATGCTTCAGCAAGAGGAAGGGT CCGAAAAGTAGCTAAGTCGGAGCCTCTAAGTGATATTGAAAGTGAAGAATCTGAAATTGCCTCTGATCTTGAATCGGCTGAATCTGATTATGAACCAGAA GGGGAAGAAAAATAACTTTTTTGAGGAGTTGCTATAGCAATGCTATCTATTGTACGAAGCTCTAAAGTACTATTGAAGTAGTGATTGTAATATTCAGCAT ATGGAATATGTTGTGAGGCTCATTTGATATGACCGCTGATTGATACAGCTGCCTCTGCTATTGAATCATCTGACTCTGATTACGATGAGCTTCAGATGTG TCAAATTTGCAGTACTGAGGAGGAAATGGAAAATTTGTTGCAGTGTTCTTCCTGTGGTAAACTTGTCCATCAAGCATGCTTGTTGATGCCTCCAGTTGGC CATTTGGTTCCTGAAGTATGGTCATGCCATATGTGCATGGAAAAAGAAAAACCAGATGATCTAAAAGCAAGACAAGCCTATCTAACTGAAATGCAGGAGA GGTATGATACAGCCTTGGAGTGTAAGACAAAAATAATAGAGGCCATTCATTCCTTGAATCTTCCAAATAATCCCTTGGATGATATTATTGACCAGTTAGG AGGCCCTGACAAAGTTGCAGAAATAACTGGAAGGAAAGGCATGCTTGTGAGGGACCCTAGTGGAAAGGGTGTAAATTACAGGGCTCGTAACACAAAGGAT GTCACTAAGGAGATGGTCAACATGCATGAAAAGCAGCTCTTTATGGATGCTAAGAAGTTAGTTGCTATTATCTCCGAAGCTGGATCAGCTGGTGTTTCTT TACAGGCAGATAGAAGAGCGATAAATCAGAAAAGGAGGATCCATATAACTTTAGAGCTTCCATGGAGTGCTGATCGAGCAATTCAGCAGTTTGGAAGAAC TCATCGCTCAAATCAAGCTTCAGCGCCACAATACAGGTTACTCTTTACAGACCTTGGTGGAGAGCGAAGGTTTGCATCAGTTATTGCTAAGAGATTAGAA TCTCTTGGTGCTTTGACTCAGGGGGACCGTAGGGCAGGACCTTCATTAAGTGCTTATAATTATGATACTACTTATGGAAAGAGGGCTTTGATGATTATGT ACAGAGGAATAATGGAGCAGGATTCTCTTCCTGTTGTACCTCCGGGATGTTTACCTGACAAGCCAGAAATGATTCATGATTTTATTACGCAAGCAAAATC TGCTCTTGTACTAGTTGGAATAATTAAGGACCCAATTCATGATTCTGGAAGGATATGTGGCCACATTACTGATTCAGACATGCAAGATGTTGGGCGATTC CTCAACCGGGTTTTGGGGCTAGCTCCTGGGATTCAGAATAGGCTATTTGAGTTATTTGTGAGTATCTTGGATCGTCTCATTCAAAATGCTCGCATTGAGG GTAACTTGGACACCGGCATTGTTGACATGAATGCTAATGTCATTGAACTAAAAGGATCTCCAAAGATTGTCCATGTTGATCAAGTGACTGGGGCTTCAAC TGTTCTGTTCACATTCATTTTCGATCGTGGGACTACATGGGAGCTGGCAAATACCATTCTGAATGAGAAGCAGAAAGATACCAATGATGGTTTCTATGAG TCAAGGAGGGAGTGGATGGGAAGGCGCCATTTCATTGTAGCACTTGAAAGTTCTGCTTCAGGTTTCTATAAGATAATTCGCCCTGCAGTTGGAGAATCAC TTCGGGAGATGCATCTGGCAGAATTAAAAAGTAAATATAGAAAACTTTCATCTTCAAAAAATGCTCAAATTGGTTGGGAAGACGAATATGAAGTTTCTTG TAAACAGTGCATGCATGGTCCGAAATGTAAGCTTCGCAACTTCTGTACAGTCGGCCGAAGACTACAGGAAGTAAATGTCTTGGGTGGCCTCATTCTTCCT CTTTGGGGAAACATAGAATCGGCCTTCTCTAAACAGGCCCGCCTAAGCCATAGGAGGCTCCGTGTTGTTCGCATAGAAACTACTTCGGATAACCAACATA TAGTTGGGCTTCTTGTTCCTAATGCAGCAGTTGATACCGTGCTTAAAGGTTTGGTTCAAGAAATAGATGGTTGACCTTAGAACAAGACTTATAACACTTT TGTTTCCTTGCAAAGTGGCAAGTAGATGCTGCCTTAATATCTGGTGGTTTTCAAAGTATACAAGCAGTATTTGTTTTTTGGTACATGCCCCAACCTTGTT GCTGAATATTTTGCCTTGCAAAGCAATTGTGCAGTCTCATTTTTGATTATTTTGATTTATCACCCATTGGTGCATATAATTCAATATTGTATGTTTGTAA AAGTGACCACTGATAATGAAACACTTTTGATGGCTCACTTATTGTGCTATACTTATGAATGGAACCTATGATTGGGATCCGATTAATATATAAAACCTTA TACACTTTCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_178827; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_448920
| Blastp | Protein FORGETTER 1 from Arabidopsis with 70.2% of identity |
|---|---|
| Blastx | Protein FORGETTER 1 from Arabidopsis with 70.18% of identity |
| Eggnog | Strawberry notch homolog(ENOG410XQ7Q) |
| Kegg | Link to kegg annotations (AT1G79350) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425700.1) |
| Pfam | PHD-finger (PF00628.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |