Ll_transcript_448923

• Id Trinity: TRINITY_DN50646_c0_g1_i8
• Name Transcript: Ll_transcript_448923
• Sequence: TCATAGCATCTTCTGAGAAAGGTTCTTCTCGTCTCCAACAACTTGTGCGGTGGTGTGGGCCACAGTTTGATGGTCTTATAATTTTTGATGAGGTATGATA TTAATTAGTATTTTAATTATTCAATTTTGAAGGGAAGTTACTTGATGATTCAAGCACCTCTTGGACTTAATTTACATTTTTTAGCTTGTTTTCTAAGGGT TAGTGACTTAATTATAGTGTCACAAAGCCAAGAATCTGGTACCTGAATGTGGTAAACAGCCAACACGTACTGGTGAAGCAGTGCTTCATATCCAGGCTCA ACTACCCGAAGCTCGTGTTGTATATTGCTCAGCCACTGGTGCATCTGAATCCCGTAATATGGCTTATATGGTTCGACTTGGTCTTTGGGGAGCTGGTACT TCGTTCAATGATTTCAGTGAATTTCTAGGTGCTCTTGAAAGAGGTGGTGTTGGAGCTCTAGAACTAGTTGCCATGGACATGAAAGCAAGGGGGATGTATT TATGTCGGACGCTAAGTTACAGTGGTGCTGAGTTTGAAGTTATTGAAGCCCCATTAGAAGATGAAATGATGGACATGTATGAAAAGGCTGCCGAGTTTTG GGTGGAATTGCATGCAAAACTGCTGTCAGCCATTAACAACCCACTGGTGAAACTTAAATGTCGTCATCTATTGGCATTATACTGGGCAAGCCACCAGCGT TTTTTTAGACACATGTGTATGTCTGCTAAAGTCCCGGCTGCTGTGAGATTAGTGAAGCAAGCATTAATGGAAGATAAGTGTGCAGTAATTGGTCTGCAAA GCACTGGGGAAGCAAGAACAGAAGAAGCTGTGGCAAAATATGGCTCTGAACTTGATGACTTTCTTTCTGGACCTCGAGAATTGTTGCTAAAGTTCGTAGA AGAATATTACCCGTTGCCAGAAAAGCCCGAGCTTCTCCCTGTAGAAGATGATGTAAAAGAGCTTCAGAGGAAGAGGCACTCAACAGGTCCTGATGCTTCA GCAAGAGGAAGGGTCCGAAAAGTAGCTAAGTCGGAGCCTCTAAGTGATATTGAAAGTGAAGAATCTGAAATTGCCTCTGATCTTGAATCGGCTGAATCTG ATTATGAACCAGAAGGGGAAGCTGCCTCTGCTATTGAATCATCTGACTCTGATTACGATGAGCTTCAGATGTGTCAAATTTGCAGTACTGAGGAGGAAAT GGAAAATTTGTTGCAGTGTTCTTCCTGTGGTAAACTTGTCCATCAAGCATGCTTGTTGATGCCTCCAGTTGGCCATTTGGTTCCTGAAGTATGGTCATGC CATATGTGCATGGAAAAAGAAAAACCAGATGATCTAAAAGCAAGACAAGCCTATCTAACTGAAATGCAGGAGAGGTATGATACAGCCTTGGAGTGTAAGA CAAAAATAATAGAGGCCATTCATTCCTTGAATCTTCCAAATAATCCCTTGGATGATATTATTGACCAGTTAGGAGGCCCTGACAAAGTTGCAGAAATAAC TGGAAGGAAAGGCATGCTTGTGAGGGACCCTAGTGGAAAGGGTGTAAATTACAGGGCTCGTAACACAAAGGATGTCACTAAGGAGATGGTCAACATGCAT GAAAAGCAGCTCTTTATGGATGCTAAGAAGTTAGTTGCTATTATCTCCGAAGCTGGATCAGCTGGTGTTTCTTTACAGGCAGATAGAAGAGCGATAAATC AGAAAAGGAGGATCCATATAACTTTAGAGCTTCCATGGAGTGCTGATCGAGCAATTCAGCAGTTTGGAAGAACTCATCGCTCAAATCAAGCTTCAGCGCC ACAATACAGGTTACTCTTTACAGACCTTGGTGGAGAGCGAAGGTTTGCATCAGTTATTGCTAAGAGATTAGAATCTCTTGGTGCTTTGACTCAGGGGGAC CGTAGGGCAGGACCTTCATTAAGTGCTTATAATTATGATACTACTTATGGAAAGAGGGCTTTGATGATTATGTACAGAGGAATAATGGAGCAGGATTCTC TTCCTGTTGTACCTCCGGGATGTTTACCTGACAAGCCAGAAATGATTCATGATTTTATTACGCAAGCAAAATCTGCTCTTGTACTAGTTGGAATAATTAA GGACCCAATTCATGATTCTGGAAGGATATGTGGCCACATTACTGATTCAGACATGCAAGATGTTGGGCGATTCCTCAACCGGGTTTTGGGGCTAGCTCCT GGGATTCAGAATAGGCTATTTGAGTTATTTGTGAGTATCTTGGATCGTCTCATTCAAAATGCTCGCATTGAGGGTAACTTGGACACCGGCATTGTTGACA TGAATGCTAATGTCATTGAACTAAAAGGATCTCCAAAGATTGTCCATGTTGATCAAGTGACTGGGGCTTCAACTGTTCTGTTCACATTCATTTTCGATCG TGGGACTACATGGGAGCTGGCAAATACCATTCTGAATGAGAAGCAGAAAGATACCAATGATGGTTTCTATGAGTCAAGGAGGGAGTGGATGGGAAGGCGC CATTTCATTGTAGCACTTGAAAGTTCTGCTTCAGGTTTCTATAAGATAATTCGCCCTGCAGTTGGAGAATCACTTCGGGAGATGCATCTGGCAGAATTAA AAAGTAAATATAGAAAACTTTCATCTTCAAAAAATGCTCAAATTGGTTGGGAAGACGAATATGAAGTTTCTTGTAAACAGTGCATGCATGGTCCGAAATG TAAGCTTCGCAACTTCTGTACAGTCGGCCGAAGACTACAGGAAGTAAATGTCTTGGGTGGCCTCATTCTTCCTCTTTGGGGAAACATAGAATCGGCCTTC TCTAAACAGGCCCGCCTAAGCCATAGGAGGCTCCGTGTTGTTCGCATAGAAACTACTTCGGATAACCAACATATAGTTGGGCTTCTTGTTCCTAATGCAG CAGTTGATACCGTGCTTAAAGGTTTGGTTCAAGAAATAGATGGTTGACCTTAGAACAAGACTTATAACACTTTTGTTTCCTTGCAAAGTGGCAAGTAGAT GCTGCCTTAATATCTGGTGGTTTTCAAAGTATACAAGCAGTATTTGTTTTTTGGTACATGCCCCAACCTTGTTGCTGAATATTTTGCCTTGCAAAGCAAT TGTGCAGTCTCATTTTTGATTATTTTGATTTATCACCCATTGGTGCATATAATTCAATATTGTATGTTTGTAAAAGTGACCACTGATAATGAAACACTTT TGATGGCTCACTTATTGTGCTATACTTATGAATGGAACCTATGATTGGGATCCGATTAATATATAAAACCTTATACACTTTCA
• Tissue: pods
• Gene name: LI_gene_178827;
• Additional information: details;

Expression of Ll_transcript_448923

FPKM

• PAB: 0.1
• PNAB: 0.7
• PS1: 0.2
• PS2: 0.2
• PS3: 0
• PW1: 0.7
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_448923

• Blastp: Protein FORGETTER 1 from Arabidopsis with 68.8% of identity
• Blastx: Protein FORGETTER 1 from Arabidopsis with 68.31% of identity
• Eggnog: Strawberry notch homolog(ENOG410XQ7Q)
• Kegg: Link to kegg annotations (AT1G79350)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425700.1)
• Pfam: P-loop containing NTP hydrolase pore-1 (PF13872.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;