Id Trinity | TRINITY_DN50648_c1_g1_i10 |
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Name Transcript | Ll_transcript_451160 |
Sequence | GTTGAAGTTAGAGCAAAAATGGTATGAAGAACATATCTGCAGCATAGTGTTCATTTCGATCTTATCAAGTATTGAGTCACTATAGGATTGAAGTTGCCTA AGAAAGTGAGACTTCAAATGGGAAACGTGTTTTCAATCAACTGCTTTGGCACTTCAAAGAAGATATCAAAAGATGAAAATAATAATCATAGCAGAGTTAG TGGTGAAGAAGAAGAAAAGAAAGTAATAATTGGAAGGAAGAAGAAGGAGAGTGTAGTTGTGAGAGGTGGTGAGAGTGTGCTTGACCTCAGTCCAAGATCC ACCGTTGGTGGTGGTGGTGAGGAAATCTACGGTGAAGATTGTGCCACCGAGGACCAACTTGTCACCCCTTGGACTTTCTCTGTTGCAAGTGGCTACTCTT TGCTAAGGGATCCACAATACAACAAAGGGCTTGCTTTCACTGAGAATGAGAGGGATGCACACTATTTGCATGGCCTCCTTCCTCCCACTGTTAGCTCCCA GGAACTTCAGGAGAAGAAACTGATGAACAGTATCCGACAATATGAGTTTCCCTTGCAGAAATACGTGGCCATGATGAACCTTCAGGAGAGGAATGAAAGA TTGTTTTACAAACTTCTGATCGATAATGTCGAGGAATTGCTCCCAATTGTATATACACCTACTGTTGGTGAAGCTTGCCAGAAATATGGGAGCATCTTCC AACGTCCTCAGGGTCTTTACATTAGTTTGAAAGAGAAGGGGGAGATTCTTGAGGTTATGAAAAACTGGCCTCATAAAAGCATTCAAGTTATTGTTGTAAC TGATGGTGAGAGGATTCTAGGACTTGGGGATCTTGGATGTCAGGGGATGGGAATTCCTGTTGGTAAATTAGCTTTGTACACAGCATTAGGAGGAGTTAGT CCTTCAGCATGTTTACCTGTTACAATTGATGTGGGGACAAATAATCAGAAATTATTGAATGATGAGTTTTACATTGGACTTAAACAAAAGAGGGCAACCG GTCAGGAATATTATGATCTTCTACATGAGTTCATGTCCGCAGTGAAGCAAAACTATGGAGAAAAGGTTCTTATACAGTTTGAAGATTTTGCAAATCACAA TGCTTTTGAGCTGCTTACAAAATATAGCACAAATCATCTCCTCTTCAATGATGATATACAGGGGACTGCATCTGTTGTTCTAGCTGGAGTTGTAGCAGCC TTGAAACTCATTGGTGGTACCCTTCCTGATCACACATTCCTCTTCCTTGGAGCTGGAGAAGCAGGAACAGGTATAGCAGAGCTAATAGCCCTTGAGATGT CAAAGCAGACTAAGACATCTATAGAAGAGAGTCGCAAGAAGATATTTCTTCTAGATTCAAAGGGTTTAATCGTTAGTTCAAGGAAGAATTCGCTTCAACA CTTCAAGAAACCTTGGGCTCATGAACATGAGCCAGTTAACACTCTCTTAGAAGCTGTTAAGATAATCAAGCCTACAGTGCTGATTGGAGCATCAGGAGTG GGGAAAACATTTACAAAGGAAGTGATTGAGGCTATAACTTCAAACAATGAAGTAAATTTTTATCTCACTCTATTGTTGCACAACTATTTGTGTGTCATAA GATATATGATTTTACATAGAAACTGTATCTCTATCATGCCTTGCCCGTAGAAACCTTTCATTTTAGCACTCTCCAATCCAACCTCGCAGTCTGAGTGTAC AGCTGAAGAGGCTTACCAATGGAGTGAGGTAAAATAATTGATAACTGGATCCATCTCTTGAACTGATATAGAATTATTTGGTGCAAATGATGCTTGACAC TCCTTCATTTTTTGTAATCTTTTGCTTGTTTTGCAAAAAAGGGTCGTGCAATTTTCGCTAGTGGGAGTCCATTTGATCCTGTTGAATACAAGGGCAAAGT CTATTACTCTGGACAGTCCAACAATGCTTACATTTTCCCGGGCTTTGGTTTGGGTATAATAATCTCCGGAGCAATCCGAGTACACGATGATATGCTTCTA GCAGCATCCGAATCCTTGGCTAAACAAGTAACAGATGAGCACTATGCAAAAGGATTGACTTACCCATCATTAACTGATATCAGAAAAATTTCAGCTAATA TAGCTGCAAATGTTGCTGCCAAGGCATATGAACTAGGCTTGGCGACACGTCTTCCTCGTCCCGAGAATCTTGTGAAGTATGCTGAGAGTTGCATGTACTC TCCATTATACCGCAACTATAGGTGAATGGGACAACTTATATGTGGAATCTGAGGCTTTTGGTTGTAATAAAGATGTTTATGGTGTATGGTGTGCTTTTAT GTGTAAGAGTGATTGGTTTTATCTTTTATGCTTTACATGCTTTTTGTTATGAAAACTTTAATTTCATCTCATGTCATGCTAGTTGCAGAGGTTATTAAAA CTTGCCAAAAAAATGGTTTCAATAATCATAATGGCTGCAGTTATTTTTTGTCCGGGCAAACTTTGGTTTAGGACAATAAATCAGCATGGCCTCTACAATG TACTGCTTTATAATTATGGGACTCCGAAAAATTTATGTCGCTCTATGTGTCATCAGTTATGATTGGTGAGAAAATTACTTTATTATTAAAATTCTAACTT AAATACGATTTTTTCAACCAATTATAGTAAGTGGCGCATGGAGCGGACATTCTTCGGAACAAATGTGTTACCATAATTATAATGATGCATATAAGAATGG CTGTTTTGGCACTCTGCATTCTAATGTAATGTTTATGTGTACTTCTTTATAATAAATGATGATGCTTATCATAATAAATGATGATGCTGTTTTGGCACTC TGCATTCTACATCATACACTTGTTCAAGAAGCATTCTACCTTGTACCTGGTTTCATGAATCTATTCCTATTTTTATTCTCTATTTTTAAATGAAAGTTTT TGTTTATCACATAGTATACCAAAACCCATACTTTAAATGTGTTTAGGAAACTTAGTAATATAAAGGGCCTAAAACAAAAAATTTCAAAATTGG BLAST |
Tissue | pods |
Gene name | LI_gene_178835; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_451160
Blastp | NADP-dependent malic enzyme from Populus with 82.19% of identity |
---|---|
Blastx | NADP-dependent malic enzyme from Vitis with 77.76% of identity |
Eggnog | malic enzyme(COG0281) |
Kegg | - |
CantataDB | Link to cantataDB annotations (CNT0000733) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019435082.1) |
Pfam | Malic enzyme, N-terminal domain (PF00390.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |