Ll_transcript_451168

• Id Trinity: TRINITY_DN50648_c1_g1_i17
• Name Transcript: Ll_transcript_451168
• Sequence: CTTCCATCTCAAAATTAAGAAGTACTTCCCTAAAGACTCTCTCTCTCTATATCAGACAACAACAACCGAAATTCTCTCTATGTCACACACTTGTTTCCTC AGCATCACGTTCTCTTCTAATACATCCACTTTCATAGTACTATAAACTTATAAACTCACACCTTTACTCATAAAACCAACCTTTATATTATATTTCACTC ATCACAACAACAAAAACCGATCTTTCTTCAAACTATCTTCAGATAACTGTATTAGTTCATCTGGGTCTTCATATTTTCACCTTTTATTCACATTTTTACG TAAACATTGTAACTCAAGGATAGTGGGTGGTGTTGAAGCTTCTCTAGTGCTTTGTTGAGGGTGGTGTGTTATTGTGATGGAGAATGAGATAAAAAATGAT GATTCTCCGGTGGTGGCTGATATCCACGGTAGCGCCACCATCGCCGGCGGTGTTCAGGATGTGTATGGAGAAGATAGGGCCACAGAGGATCAGCTTCTTA CTCCATGGAGTACCTCTGTTGCTAGTGGGTATACTTTGTTGAGAGATCCACACTATAACAAAGGGTTGGCTTTCACTGAACTAGAGAGGGATGCTCATTA CTTGCGTGGTCTTCTTCCTCCTACAGTTATTTCTCAAGATACTCAGGTGAAGAAACAAATCCAACTCATACGCGAGTATCAAGTTCCATTGCAGAAGTAC ACAGCAATGATGGCTCTTCAGTTGAGAAATGAAAGGCTGTTTTACAAGGTTCTTATCGATCATGTCGAGGAGTTACTTCCGGTTGTCTATACTCCGACCG TTGGTGAAGCATGCCAGAAATATGGGAGCATTTTCATGCGTCCTCATGGTCTTTACATAAGTTTGAAAGAAAAAGGAAAGATTCTTGAGGTACTAAGGAA TTGGCCTGAGAGGAGGATTCAGGTCATTGTCGTAACAGACGGAGAACGGATCTTGGGTCTTGGGGATCTTGGATGTCAGGGAATGGGAATACCAGTGGGA AAACTTGCTTTATATACAGCACTTGGCGGAGTTCGTCCATCTTCATGCTTGCCTATTACCATTGATGTGGGTACAAACAATGAGAAGCTGTTGAATGACG AATTATATATAGGGCTCAAACATAGACGAGCAACTGGGCAGGAATATGCTGAACTTCTTAATGAATTTATGATTGCTGTCAAGAAAAATTATGGAGAAAA AATCCTTGTCCAGTTTGAAGACTTTGCAAACCACAATGCATTTGATCTACTTGAAAAATATAGGAAGACACATCTTGTTTTTAACGATGATATTCAGGGA ACAGCATCAGTGGTCCTTGCAGGACTGGTTGCGGCTCTGAAATTAGTTGGGGGAAGCTTATCTGACCACAAGTTTTTATTTCTCGGTGCTGGAGAGGCTG GCACTGGAATAGCAGAACTCATAGCACTCGAATTATCGAAACGGACAAGTCTCCCAGTCGATGAAGTGCGCAAGAACATTTGGTTGGTGGACTCGAAGGG ATTGATTGTTAGTTCCCGTAAAGAATCACTCCAACATTTTAAGCAGCCTTGGGCTCATGAACATGAACCTGTTAAGCAACTTTTAGATTGTGTCAATCAA ATTAAACCAACAGTGTTGATCGGAACATCGGGACAAGGGAGCACTTTTACTGAAGAAGTGATTGAGTCTATGGCCTCCAATAACGAGAAACCTATTATTT TTTCCCTTTCCAACCCAACATCACAGTCAGAATGTACTGCTGAAGAAGCATACACATGGAGCCAGGGACGTGCTATTTTCGCTAGCGGTAGTCCATTTTC TCAAGTTGAATATGAAGGAAAAGTTTTTCTGCCAGGCCAGGCCAATAATGCATACATTTTTCCTGGATTTGGTCTTGGTTTAATAATGTCCGGGACCATT CGAGTGCATGATGACCTGCTTTTGGCAGCTTCTGAAGCATTGGCTTCACAAGTGACTCAGGAGAACTATGACAATGGACTCATATTCCCACCATTCACTA ACATCAGAAAGATTTCAGCACACATAGCTGCCAGTGTTGCTGCTAAGGCCTATGAGCTTGGTTTGGCTACTCGACTTCCTCAACCGAAAGATTTGGTCAA ATTTGCTGAGAGCTGTATGTATACTCCAGCCTATAGAAACTACCGGTGAACAGACAATAACCACATTTTTTTTATTTTTTTATAAATTTTTTGGGTTTTT AACATTAAATAATGTACTTAGTTTTATGTATTTTTTTTCATTTTTCAAATTATTTTTTTGTAACTTACTATTGAATTGGGTGGCATAGAAGAGAG
• Tissue: pods
• Gene name: LI_gene_178835;
• Additional information: details;

Expression of Ll_transcript_451168

FPKM

• PAB: 0.1
• PNAB: 0.3
• PS1: 0.2
• PS2: 0.2
• PS3: 0
• PW1: 0.4
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_451168

• Blastp: NADP-dependent malic enzyme, chloroplastic from Flaveria with 77.01% of identity
• Blastx: NADP-dependent malic enzyme 4, chloroplastic from Arabidopsis with 81.11% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0000734)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430328.1)
• Pfam: Malic enzyme, N-terminal domain (PF00390.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;