Ll_transcript_451152

• Id Trinity: TRINITY_DN50648_c1_g1_i5
• Name Transcript: Ll_transcript_451152
• Sequence: GGGTTTTTTCTTGAGCTGCACCCCCTTATTAATGCTGACAGAATGAGTTGAATATTTGTTCATGCCACAGTTTTTATATTTCATTCTATGAAAGTAAAGC CTAAAGAGGAGGGTCAGTAAGAAGAGAGAAACAAGTACCATAGCACTCTCTTCTTCTTTTAACTCTTTTTCTATCTTCTTTTCTTAATCATATACACACC ATTTCTCAAATCTCTTTCTCCATTCCATCATGATCTCTTCCAAAGGATGCGCATTCCTGAGCAACTCAGGGTTAGGTGGGTCGAGCAATTTCTCTGGTGC ACAGAGAAGAGTTTCGGGTCCATTCAGAGTGGTTTGTATGACACCAAGCAACAGGGGTGGTGACAAAAGCGGCAGCGTTGTGATGGAGATTGAGACACCG TCAACACCCTTGAAAGAAATAAGGAGTGATTCAGCGGTGGCTGATGTGGACGATAATGAAATCTCCTCCGGCGGCCCTCAGGATGTGTACGGCGAGGATA GGGCCACGGAGGATCATTTTGTTACTCCTTGGAGTGTCTCTGTTGCTAGTGGTTATACATTGTTGAGAGATCCTCACTTCAACAAAGGGCTGGCCTTCAC GGAAAAAGAGAGGGATGCCCACTACTTGCGCGGTCTTCTTCCACCAACAGTTATTCCTCAAGAAACTCAGGTGAAGAAAATGATCCAACACGTACGCCAG TATCAGGTTCCATTGCAGAAATACATGGCAATGATGGATCTTCAGGAGAGAAATGAGAGGCTGTTTTATAAGCTTCTTATTGATCACGTTGAAGAGTTAC TCCCAGTTGTCTATACTCCTACTGTTGGTGAAGCTTGCCAGAAATACGGGAGCATCTTCATCCACCCTCAGGGTCTTTATATAAGTTTGAAAGAGAAGGG GAAGATTCTCGAAGTACTAAGAAATTGGCCCGAGAAGAACATTCAAGTTATTGTTGTAACTGACGGAGAAAGGATCCTAGGTCTTGGGGATCTTGGTTGT CAGGGAATGGGAATACCAGTGGGAAAACTTTCTTTATATACTGCACTCGGGGGAGTTCGTCCTTCAGCTTGCTTGCCTATTACCATTGACGTGGGTACAA ACAATGAGAAGCTGTTGAATGATGAATTATATATAGGGCTCAAGCAAAGACGAGCAACTGGACAGGAATATGCTGAACTTATGCACGAATTTATGTCTGC AGTCAAGCAAACTTATGGGGAAAAAGTCCTCATTCAGTTTGAAGACTTCGCAAACCACAATGCTTTTGATCTGCTTGAAAAATATAGATCAACACATCTT GTTTTCAATGATGATATTCAGGGAACAGCATCAGTGGTCCTTGCTGGCCTAGTTGCAGCTCTGAAATTGGTCGGAGGAAACTTAGCTGACCACAGATTCT TATTCCTTGGTGCTGGAGAGGCTGGTACTGGAATAGCAGAACTCATAGCACTTGAAATATCAAAGCAGACAAATGTACCTCTGGAGGAAGCACGCATGAA CATATGGTTGGTGGACTCAAAGGTTGTGTGTAATCCAATTTAGCTCCACCTGGTATGAAGTAGATTCACATCAATCTGGTTAATCTTTTATTCCTACTTT CACAGGGATTGATCGTCAGTTCCCGTAAAGGATCACTTCAACATTTTAAGAAGCCCTGGGCTCATGAACACGAACCTGTTAAAAAACTTGTTGATGCTGT TAATGTATGATTGATCTTTATATACATTACAATCAGATACAGACATGCACATAATCTCAATCTTACATTTTCAATGTTATTTCCTCAGCAAATTAAGCCT ACAGTGTTGATTGGAACATCGGGGCAAGGAAGAGCTTTTACTAAGGAGGTGGTCGAGGCTGTGTCCTCTATCAATGAGAAACCTATTATTCTTTCTCTTT CCAACCCAACATCACAGTCAGAATGTACTGCTGAAGAAGCTTATTCGTGGAGCCAGGGACGTGCCATTTTTGCTAGTGGGAGCCCATTTCCCCCAGTTGA ATATGCAGGGAAAGTGTTCGTACCTGGCCAGGTATAACCATATCATGACATCAACCCTCCGAGATTTTATATAAATATTATAATTTGGTATAAGTTCTAG TTTGGATTTTGTTCTTTCTTTGTTCACCAGGCTAATAATGCATACATATTTCCTGGATTCGGTCTGGGTTTAATAATGTCTGGTACGATTCGAGTGCATG ACGACCTGCTTCTGGCTGCATGTAAGTGCACAAGATAAGATTTTCAATGTTGAAAATTGGAGTACTGAAATATGATTTTGAACAAATGTATAATGTATAT ATATACTATATATGTGTTGTTTTTTCCCTTGGTATAAATTATCCTTTGGAATCACTACATTTTATAAATAAGCTTGGTATTAAAAGTTCTTATACTATAC CACCATGAATGTAAATTACAATGTCTTCTATTATTTGGTTGAAACAGCCAAGGCGTTGGCCGCAGAAGTGAGCCAGGAGAACTTTGAGAAGGGACTCATA TTCCCACCATTCACTAA
• Tissue: pods
• Gene name: LI_gene_178835;
• Additional information: details;

Expression of Ll_transcript_451152

FPKM

• PAB: 0.6
• PNAB: 0.5
• PS1: 0.4
• PS2: 0.2
• PS3: 0.4
• PW1: 0.2
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_451152

• Blastp: NADP-dependent malic enzyme 4, chloroplastic from Arabidopsis with 75.35% of identity
• Blastx: NADP-dependent malic enzyme 4, chloroplastic from Arabidopsis with 80% of identity
• Eggnog: malic enzyme(COG0281)
• Kegg: Link to kegg annotations (AT1G79750)
• CantataDB: Link to cantataDB annotations (CNT0000734)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458538.1)
• Pfam: Malic enzyme, N-terminal domain (PF00390.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;