Ll_transcript_449228

• Id Trinity: TRINITY_DN50650_c1_g1_i4
• Name Transcript: Ll_transcript_449228
• Sequence: TGTCTCTTATAGCTGGGCAGAAAGCTTTTATTTATTGTCTTCATGATGACGATGACAGGGGGAAAGAGGTTGGAGTCTTTCTTGTGATACACAAACAAAC GTTTCACGACTCTGCGTCTCTCTCTCTTTATTTTCGTTGTGACTAGATGAAACAGTTTTTTCTGGGGTGGTGATGGTTTTGTTTTGGTATCGGTGAGGGA TCTGAGTTGAAGGTGTTGATGTTATGGGGGCTTGTGTGTCAACTCCAAAAGCGTGCATAGGAGGGAGGTCGAGTTCTAATTCCAAGAGGAAGACACGGAA GAGGAGGAGTAATGGACTCAGGAGAAGAGTGCCTTCAAAGTTGTCTAAGGGATCATTGGACAAAGTTGATGTTCCTGCATTACCTGATGGTTCCTTTGTC AACCCTACTTTCCAAGGTTCATGCTTTTCCTCTTCTTGTTTTTTGTTTACAACATGCATTTGGGTTTTTGGTTCTTGATTCCTTTTGGATTGGAATTTGT TGTTGGGATCCTTCTAATTGAGTCTTTCTTGGTTTTGATGAGCTTGTTAAATGAATTAATGTGGAATGTTATGTTTCTTGAGCATTATGTTCAGAAGATG AACTGCCATGTCCAATCGTCCATACTGGCAAAATGGCTTAATCAGGTAGTCATAATTGATATTATCAGGAGTTAGAGATTCTTCTCCCATGCTGTCCAAA AAGCTTTCTGTGATAGCGGCTTGAATGACTGAATCATGTGTCCATCCTCTTAACCTCATTTCTGTGATAAGGTAATCCAATGAACATTGTGCATGAATAA AATCCTTTAATCTCAGAGCAAATAGGACTCTACTTTCTATACAGGTCAAAACTCTTTCTTATTACAATACCGAGTATCTCCCCAACTTTCCTCAAGTCAT TAGCTTGGCAGTGGCCCTGAATAAGCATGTTACAGAGTCCATCATCTGGAATTAGTCCTTCGGACAACATATCATGTAATAGGGTGTCAGCCTTCCCAAT ATTACCTATGTTACAAAATCCGGATATCAATGCACAATGAGCAGCATAAGAAAATGAAGGCTGCTCTTTCAAAATGATATCTTTCAATGCAATCGCTTTG TCATATCTTCCAGCCTTACATAATTGAGGGATTAGCACGACAGAAACATCTGAACAAGTGGCCAAACTTTTATCTAGCATATCATCTAGTATTGTAAAGG CTACAGAAATTTTCCCCTCATTACAAATACCCCTTATTAGATTATTATAACCAACATGATCCAACACAAAACAATGTTGTAGCTGTTGAAGAACTACAAC TGCAATGCTTGTAAGACCCGTAGTACAAAGTACTTCTAGAAATACATGACATATATCTGATCTAAGGTATGGGTATGTTAGCAGCATGATTTCAAGGAGC TGTAATGCTTCCCTAACCATTTTTCGATGGCCGATAGAGAAAATAAGATGTTTAAATTCCTCCAATCCTGGTGACCATTTATTTCTACAAGTAATGCCCA AGTAATAATTAAGGTCTTTCTTGGTTGTGATGAGCTTGTTAAATGTATCAATGTTTCTGGGCCTTTTGTGGGAGTTGAAGTTTGGACTCTGGAAATGTTG TTGCTGAGTTGATTTCTTGTATTGCAATAGAAGGCTGATGTAACAGCAGAAATGTCAAACAATTACTTTAGGAGGATGGAGTAAATGTTAATAATTAGTG GCACTAAATTACAAATCAACCACTCTAGTTCACAACCAAAAGCAATGCTAGTAATTGTGATGGCAGGCTTAGGTAAATCATTTTATTTTCTATATGAAGG GGAGGTGTTGAAATCCACCTTTTGGAATGAACATAATAAGATTTCTGGTGGAAAAGTGGTATTGAAATTTGGGGTATTCGTAATACTCATGTCTCTGTAT GAGCAGTTGAGCATAACTGCTCTAGGTGAGTTGTACCCATTTCAACTTGTTTTGCATTTTGAATAACGAGAACTTAAAACTTGCATTTGTTGCTTGGATT AGGTCCTTATTATCACATACATGGAGAGAGGGGTTGCAGAATCAGAACATATGATAGCATGCATTATATTAACTTCTGAAGTAGTTTAAATGTAAATCTT GCTATGAAAAGTAAATGCATATATCTGTCACTATGGATTTCATTTCAGTCTTTACTTTTCTGTTTGGTGAACCAATTCTAGTCCATTCTTTCAATTTTAT GGCCCTGGGGATATATTCCATCTGCTGGTGATTGCTTATTGTTTCCCCTCTCGAGACATTTTGCTCAGCTTGTAAAATATCATCTAGTTTAACTGGTGGT TGTGAATAAAACCCTCTCCTTTTCCTGAAATCCTAGTTGGCTTTTATATTAATGACCTTCATTATTACTAACTTGTTTTGGGAGTTTTAATATGTGGCAG CTGGAAGTACTGAGGAGTCATGGTTTGATTCATTTGCAGTATTTGACTCTGATT
• Tissue: pods
• Gene name: LI_gene_178853;
• Additional information: -

Expression of Ll_transcript_449228

FPKM

• PAB: 0.3
• PNAB: 0.4
• PS1: 0
• PS2: 0
• PS3: 0.5
• PW1: 0
• PW2: 0
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_449228

• Blastp: Pentatricopeptide repeat-containing protein At5g15280, mitochondrial from Arabidopsis with 39.8% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g15280, mitochondrial from Arabidopsis with 33.22% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G15280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440684.1)
• Pfam: PPR repeat (PF12854.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;