Ll_transcript_449852

• Id Trinity: TRINITY_DN50659_c2_g1_i1
• Name Transcript: Ll_transcript_449852
• Sequence: ATACTTTTTCTATGTGTAGGCTTAAGCATTGGAGTGTAGAGTCTTCCCTTCTTCCTTTGTAACAAAACTCTTTCTTCAATATACACACAAATACTTCAAA CTCAGATGACAAAATCATCAAAATCTTGTGTTAAATTCTCATTATATTCTCTTCTAATCTTCATTCTTTTACTGAACCATGCAAACTCTTATTCTGATAT ATATAAGGAAGAACATATAGTCCTAATGAATATAAAACAGTACCTACAAAACCCACCATATCTTAGTCATTGGACCCTATCAAACTCTTCTCATTGTTCT TGGCCAGAACTAAACTGCACCAATGATTCTGTTACTGGTTTATCTCTTGTTGAGTCTAATATCAACCAAACAATACCATCTTTCATATGTGACCTCAAAA ATCTCACACATGTTGATTTCAGTATAAATGATATTCCTGGAGAGTTTCCAAGGTATCTTTATAATTGTTCCAAGCTTGAATATTTGGACTTGTCTATGAA TAACTTGTATGGCAAGGTTCCTGAAGATATTGAAAGTTTGTCTAGTTTGCAGTATCTTAACCTTGGTTCAACCAATTTTTGTGGTGATATTCCTGTGAGT ATTGGAAGGTTAAAGGGTCTTAGAGTACTTCAACTTCAATATTGTTTGTTCAATGGAACTTATCCTGATGAAATTGGCAACTTGTCCAATCTTGAAACCT TGGATTTGTCGTCTAACTCCGAGCTCCCTCAGTCGAGTTTGCCATCGAGTTGGACTAAGTTGAGCAAATTGAAGGTGTTTTATATGTATGGCTGCAACTT GGTTGGGGAAATCCCTGAAACCATTGGAGAAATGGTGGCATTGGAGAAGTTGGATTTGTCAGAAAACAAATTAACTGGGCCGATTCCAAAAGGTTTGTTA TTGCTGAAGAATCTGACCAATCTATATCTTCAACACAACAGTCTATCTGGCGAGATACCTGATGCGATTGAAGCGTTAAACTTGACAGCTATCGATCTCA CGAGGAATGATCTATCAGGGAGAATACCTGATGACTTTGGAATGCTCACAAAGTTAACAGGCTTGTGCTTGTCTGGAAATAAGTTGTCAGGGGAGATACC AGAAAGCATAAGTCGGTTTCCATATCTGAAAGATTTTCGAGTATTTTTCAACAATTTATCAGGTACTCTTCCTCCTGATTTTGGCCGATTCTCGAAGCTA AGATCCTTCCACATTTCTTCCAATAAATTTTCAGGAAGGCTACCAGAGAATTTATGCTATTATGGTGAGTTACTTAATTTAACTACTTATGACAATAGTC TCAGTGGAGAGTTGCCAGAATCACTAGGGAATTGTAGTAGCCTGATGGACTTAAAAATTTACAATAATCAGTTTTCGGGTAACATTCCTAGTGGTCTTTG GAAATCTTCCAATTTGTTAAATTTCATGGTGAGGCAGAATAAGTTTACTGGTGAACTTCCTGATAGATTGTCTTCAACTATTTCGCGCTTCGAGATAAGT TATAATCAGTTTTCGGGTAGAATTCCTGCTGGAGTATATTCCTTGAAGAATGTTGTAGTGTTTAATGCTAGTAAGAATTTCTTGAATGGAAGTTTTCCTC AAGAGCTAGCAACTCTTTCCAAGCTAACAACTCTTTTGCTAGACCAGAATCATCTCACTGGGTCAATTCCATCAGATATAATTGCGTGGAAGTCATTAGT GACTCTTAATTTGAGCCAAAACCAACTCTTTGGGCAAATTCCAGATACAATTGGTAACTTACCTGTCCTTAGTCAGCTTGATCTGTCCAAAAATCAATTC TCCGGAAAAGTTCCTTCTGAACTTCCTAGACTCACCAATCTCAATCTGTCCTCGAATCGTTTGACAGGGCAAATTCCGAGTGAATTTGGAATATCTGCAT TTGCCAGCAGCTTTTTGGACAATCCCGGTCTCTGTACTGATAACCCAGCACTAAACCTTACCTTGTGCAATGCCCATCCTCAAAGGCGAACCAAAGGTTC ATCTTGGTCTCTCCCTTTGATTGTAAGCCTGATAGCAGTATTCTTTGGATTGGCTTTGTTGGCAACACTCTTGATCATTAGACTCTTCAGAAAAAGAAAG CAACGGTTGGATAACTCATGGAAGCTCATTTCCTTTCAAAGGCTGAGTTTCACAGAATCAAACATAGTGTCATCATTAACAGAACATAATATCATCGGCC GTGGTGGATATGGCACAGTATACCGTGTCCCTGTCGATGATTTAGGCTATGTTGGTGTGAAAAAGATTTGGAATAACAGAAAGTTAGACAAGAAGCTAGA GAGTTCCTTTCATGCTGAAGTTAAAATATTGAGCAATATTCGGCATAACAACATTGTGAAGTTGTTGTGCTGTATCTCCAATCAGGATTCTATGCTCCTT GTATACGAATATCATGAAAACCGAAGCCTCGATAGGTGGCTATGCAAGAAGAGTAAGTCATCAGGCATGTCAGGTTCAGTCCACCATGTTGTACTTGATT GGCCAAAGAGATTGAAAATTGCCATTGGAATTGCTCAAGGTTTGTGCTATATGCACCATGATTGTTCACCACCTATTGTTCATAGAGATGTGAAAACAAG CAACATACTTTTGGATGTTCAATTCAATGCAAAAGTTGCTGATTTTGGTTTGGCTAGGATGTTGGTCAAGCCAGAAGAACTTGAGACCATGTCAAATGTT GTTGGCTCATTTGGATATATTGCTCCAGAATATATTAAAACAACCCGAGTCAGCGAAAAAGTTGATGTCTTCAGCTTTGGTGTTATCTTATTGGAACTGA CTACTGGGAAAGAAGCTAACTATGGAGATGAACACTCATCTCTTGCAGAGTGGGCGTTGCGCCACGTTCAATTAGGAAGCGATATCGATGAACTCCTAGA CAAAGATGTAATGGAACTCAGTTATGTGGATGAAATGTGCAGTGCTTTCAAACTTGGGATTATGTGCACTGCAACACTACCTGCTAGTAGGCCTTCCATG AAGGAAGCTGTGCAGATATTGCACCGTTGTGGTGAAGGATTTACTTTTGCAGAGAGGAATGTTGGGCAGTATGATGCTGTTCCCCTTCTTAAGAATTCAA AAAGGCAGCATAGTTTTGATTTTTCTGATAATGACAGTGGATAATGGAGAGGACGAGTCTTGGATATCACATGTTCAAATCTTAGGAACTGCCTCTCTAC TTGTAAGGAATTTAAGAGAGCAGAGAATGAAGCTGAAAAGTATAAGATCTTGGTGCGAATTGGAAGCTTGGTCAAGTTCCTCAAGCGCTAAGCGCACGCG TTTGAAGCACCGAGTGTCCAAGCCAATTTAGTACAGGTGCTCTCTGCCAGTCAAGTGTTTAGTGGTTGATCATGTGCTGGCCCATCAATTAGTGAATCAT TTGTTTCTGGTTCTTGAGCACTCATTTCAGATCAACATAAAACCTTAGGTGAAGTTTGTGAGGGGACTTTTTCAGCAGTCATTTTTTGTGACATATGACT GCTTCAAATCCTAATTTCGGGAACCCCTACGTCGTGTGAATCATACACTAGTGAAAGTTCGCCTTGATCTTCACGAATTCCCGGAGTAGCTTTTGACTTT AAACAAAAAAATGTTCTTCAAGATGTATATTAGGACTGAGGCGGTTAGTTAGTTAGTTATGATTAGTTGAGACAGTTATTAGGCTTAGTTTTTCAGAATT GTTAGCTTTGTAATAACTGAGATATCCTCCTAGTTCTGTTCATTTTTTAGTGAAGTAATAAAACAACTGTTTTTTTCTCCATTTTCATTTCAGTTTCTCT TCTGGCTTGATTGGTTTCTCCATTTATAGTTCTGTTTGCTATTGATCTCTGATACCATGTTTAAATTTAGACGAATCCCG
• Tissue: pods
• Gene name: LI_gene_178907;
• Additional information: details;

Expression of Ll_transcript_449852

FPKM

• PAB: 12.1
• PNAB: 2.8
• PS1: 5.3
• PS2: 1.7
• PS3: 2.6
• PW1: 4
• PW2: 6.1
• PW3: 4.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_449852

• Blastp: Receptor-like protein kinase HSL1 from Arabidopsis with 38.15% of identity
• Blastx: Receptor-like protein kinase HSL1 from Arabidopsis with 38.6% of identity
• Eggnog: leucine Rich Repeat(COG4886)
• Kegg: Link to kegg annotations (AT1G28440)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448353.1)
• Pfam: Leucine rich repeat N-terminal domain (PF08263.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;