Ll_transcript_449857

• Id Trinity: TRINITY_DN50659_c2_g1_i4
• Name Transcript: Ll_transcript_449857
• Sequence: ATACTTTTTCTATGTGTAGGCTTAAGCATTGGAGTGTAGAGTCTTCCCTTCTTCCTTTGTAACAAAACTCTTTCTTCAATATACACACAAATACTTCAAA CTCAGATGACAAAATCATCAAAATCTTGTGTTAAATTCTCATTATATTCTCTTCTAATCTTCATTCTTTTACTGAACCATGCAAACTCTTATTCTGATAT ATATAAGGAAGAACATATAGTCCTAATGAATATAAAACAGTACCTACAAAACCCACCATATCTTAGTCATTGGACCCTATCAAACTCTTCTCATTGTTCT TGGCCAGAACTAAACTGCACCAATGATTCTGTTACTGGTTTATCTCTTGTTGAGTCTAATATCAACCAAACAATACCATCTTTCATATGTGACCTCAAAA ATCTCACACATGTTGATTTCAGTATAAATGATATTCCTGGAGAGTTTCCAAGGTATCTTTATAATTGTTCCAAGCTTGAATATTTGGACTTGTCTATGAA TAACTTGTATGGCAAGGTTCCTGAAGATATTGAAAGTTTGTCTAGTTTGCAGTATCTTAACCTTGGTTCAACCAATTTTTGTGGTGATATTCCTGTGAGT ATTGGAAGGTTAAAGGGTCTTAGAGTACTTCAACTTCAATATTGTTTGTTCAATGGAACTTATCCTGATGAAATTGGCAACTTGTCCAATCTTGAAACCT TGGATTTGTCGTCTAACTCCGAGCTCCCTCAGTCGAGTTTGCCATCGAGTTGGACTAAGTTGAGCAAATTGAAGGTGTTTTATATGTATGGCTGCAACTT GGTTGGGGAAATCCCTGAAACCATTGGAGAAATGGTGGCATTGGAGAAGTTGGATTTGTCAGAAAACAAATTAACTGGGCCGATTCCAAAAGGTTTGTTA TTGCTGAAGAATCTGACCAATCTATATCTTCAACACAACAGTCTATCTGGCGAGATACCTGATGCGATTGAAGCGTTAAACTTGACAGCTATCGATCTCA CGAGGAATGATCTATCAGGGAGAATACCTGATGACTTTGGAATGCTCACAAAGTTAACAGGCTTGTGCTTGTCTGGAAATAAGTTGTCAGGGGAGATACC AGAAAGCATAAGTCGGTTTCCATATCTGAAAGATTTTCGAGTATTTTTCAACAATTTATCAGGTACTCTTCCTCCTGATTTTGGCCGATTCTCGAAGCTA AGATCCTTCCACATTTCTTCCAATAAATTTTCAGGAAGGCTACCAGAGAATTTATGCTATTATGGTGAGTTACTTAATTTAACTACTTATGACAATAGTC TCAGTGGAGAGTTGCCAGAATCACTAGGGAATTGTAGTAGCCTGATGGACTTAAAAATTTACAATAATCAGTTTTCGGGTAACATTCCTAGTGGTCTTTG GAAATCTTCCAATTTGTTAAATTTCATGGTGAGGCAGAATAAGTTTACTGGTGAACTTCCTGATAGATTGTCTTCAACTATTTCGCGCTTCGAGATAAGT TATAATCAGTTTTCGGGTAGAATTCCTGCTGGAGTATATTCCTTGAAGAATGTTGTAGTGTTTAATGCTAGTAAGAATTTCTTGAATGGAAGTTTTCCTC AAGAGCTAGCAACTCTTTCCAAGCTAACAACTCTTTTGCTAGACCAGAATCATCTCACTGGGTCAATTCCATCAGATATAATTGCGTGGAAGTCATTAGT GACTCTTAATTTGAGCCAAAACCAACTCTTTGGGCAAATTCCAGATACAATTGGTAACTTACCTGTCCTTAGTCAGCTTGATCTGTCCAAAAATCAATTC TCCGGAAAAGTTCCTTCTGAACTTCCTAGACTCACCAATCTCAATCTGTCCTCGAATCGTTTGACAGGGCAAATTCCGAGTGAATTTGGAATATCTGCAT TTGCCAGCAGCTTTTTGGACAATCCCGGTCTCTGTACTGATAACCCAGCACTAAACCTTACCTTGTGCAATGCCCATCCTCAAAGGCGAACCAAAGGTTC ATCTTGGTCTCTCCCTTTGATTGTAAGCCTGATAGCAGTATTCTTTGGATTGGCTTTGTTGGCAACACTCTTGATCATTAGACTCTTCAGAAAAAGAAAG CAACGGTTGGATAACTCATGGAAGCTCATTTCCTTTCAAAGGCTGAGTTTCACAGAATCAAACATAGTGTCATCATTAACAGAACATAATATCATCGGCC GTGGTGGATATGGCACAGTATACCGTGTCCCTGTCGATGATTTAGGCTATGTTGGTGTGAAAAAGATTTGGAATAACAGAAAGTTAGACAAGAAGCTAGA GAGTTCCTTTCATGCTGAAGTTAAAATATTGAGCAATATTCGGCATAACAACATTGTGAAGTTGTTGTGCTGTATCTCCAATCAGGATTCTATGCTCCTT GTATACGAATATCATGAAAACCGAAGCCTCGATAGGTGGCTATGCAAGAAGAGTAAGTCATCAGGCATGTCAGGTTCAGTCCACCATGTTGTACTTGATT GGCCAAAGAGATTGAAAATTGCCATTGGAATTGCTCAAGGTTTGTGCTATATGCACCATGATTGTTCACCACCTATTGTTCATAGAGATGTGAAAACAAG CAACATACTTTTGGATGTTCAATTCAATGCAAAAGTTGCTGATTTTGGTTTGGCTAGGATGTTGGTCAAGCCAGAAGAACTTGAGACCATGTCAAATGTT GTTGGCTCATTTGGATATATTGCTCCAGGTGAATGTCATGCCAATCTTTTCATTTTCATACTAAGTTTTGTGTTTCTTTCTCTACTTTCTCATGTATGTT CAATTTTGGTTTCTCGAATCGCAGAATATATTAAAACAACCCGAGTCAGCGAAAAAGTTGATGTCTTCAGCTTTGGTGTTATCTTATTGGAACTGACTAC TGGGAAAGAAGCTAACTATGGAGATGAACACTCATCTCTTGCAGAGTGGGCGTTGCGCCACGTTCAATTAGGAAGCGATATCGATGAACTCCTAGACAAA GATGTAATGGAACTCAGTTATGTGGATGAAATGTGCAGTGCTTTCAAACTTGGGATTATGTGCACTGCAACACTACCTGCTAGTAGGCCTTCCATGAAGG AAGCTGTGCAGATATTGCACCGTTGTGGTGAAGGATTTACTTTTGCAGAGAGGAATGTTGGGCAGTATGATGCTGTTCCCCTTCTTAAGAATTCAAAAAG GCAGCATAGTTTTGATTTTTCTGATAATGACAGTGGATAATGGAGAGGACGAGTCTTGGATATCACATGTTCAAATCTTAGGAACTGCCTCTCTACTTGT AAGGAATTTAAGAGAGCAGAGAATGAAGCTGAAAAGTATAAGATCTTGGTGCGAATTGGAAGCTTGGTCAAGTTCCTCAAGCGCTAAGCGCACGCGTTTG AAGCACCGAGTGTCCAAGCCAATTTAGTACAGGTGCTCTCTGCCAGTCAAGTGTTTAGTGGTTGATCATGTGCTGGCCCATCAATTAGTGAATCATTTGT TTCTGGTTCTTGAGCACTCATTTCAGATCAACATAAAACCTTAGGTGAAGTTTGTGAGGGGACTTTTTCAGCAGTCATTTTTTGTGACATATGACTGCTT CAAATCCTAATTTCGGGAACCCCTACGTCGTGTGAATCATACACTAGTGAAAGTTCGCCTTGATCTTCACGAATTCCCGGAGTAGCTTTTGACTTTAAAC AAAAAAATGTTCTTCAAGATGTATATTAGGACTGAGGCGGTTAGTTAGTTAGTTATGATTAGTTGAGACAGTTATTAGGCTTAGTTTTTCAGAATTGTTA GCTTTGTAATAACTGAGATATCCTCCTAGTTCTGTTCATTTTTTAGTGAAGTAATAAAACAACTGTTTTTTTCTCCATTTTCATTTCAGTTTCTCTTCTG GCTTGATTGGTTTCTCCATTTATAGTTCTGTTTGCTATTGATCTCTGATACCATGTTTAAATTTAGACGAATCCCG
• Tissue: pods
• Gene name: LI_gene_178907;
• Additional information: details;

Expression of Ll_transcript_449857

FPKM

• PAB: 0.5
• PNAB: 0.1
• PS1: 0.1
• PS2: 0
• PS3: 0.1
• PW1: 0.4
• PW2: 0.4
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_449857

• Blastp: Receptor-like protein kinase HSL1 from Arabidopsis with 36.96% of identity
• Blastx: Receptor-like protein kinase HSL1 from Arabidopsis with 37.38% of identity
• Eggnog: leucine Rich Repeat(COG4886)
• Kegg: Link to kegg annotations (AT1G28440)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448353.1)
• Pfam: Leucine rich repeat N-terminal domain (PF08263.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;