Id Trinity | TRINITY_DN50659_c2_g1_i9 |
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Name Transcript | Ll_transcript_449869 |
Sequence | CTTCACTGGTGTGCTTCCCGAAATACTGTCTTCAAATATTTCGCTCTTTCAGATAAGTTCCAATCAGTTTTCTGGTAGAATTCCAACCGGAGTATCATCC TGGACTAATGTGGTAGTGTTTGATGCCAGTAAGAACTACTTGAATGGAAGTATTCCGCAAGAGCTAACAACTCTTCCCAGATTAACCACTCTTTTGCTTG ACCAAAACCAGCTCATAGGGCCACTTCCATCAGAAATAGTATCATGGAAGTCTCTAGCAAATCTAAATTTAAGCCGAAACCAACTCTCTGGACAAATCCC TGATGCAATTGGTCAGTTACCTGTCCTTAGTCAGCTTGACTTGTCAGAAAACCAATTCTCTGGCCAAATACCTTCAAGACTTCCTAAACTCACCAATCTC AATCTATCTTCCAATAACTTGACAGGGAAGATTCCAAGTGAGTTTGAAAATTCGGCATATGCGAGTAGCTTTTTGGACAATCCCGGCCTTTGTTCTGACA CACAAGCACTTAATCTTACCTTGTGTAATTCTGGAACTACTGAAAGGTCAAGCAAGGACTCATCTAGGTCTCCAGCTTTGATTATAAGCCTTGCGGTTGT AACCTTCTTACTCGCTTGTTTGATGTCATTCTTGATTATCAGACGTTGCAGAAAGAGAAAGCAAGGACTTGATAACTCATGGATTCTCATCTCCTTTCAG AGGCTGAATTTCACTGAATCAAACATAGTGTCTTCAATGACAGAACATAATATTATTGGAAGTGGTGGATATGGCACAGTATACCGTGTCCCTGTCGATG ATTTAGGCTATGTTGGTGTGAAAAAGATTTGGAATAACAGAAAGTTAGACAAGAAGCTAGAGAGTTCCTTTCATGCTGAAGTTAAAATATTGAGCAATAT TCGGCATAACAACATTGTGAAGTTGTTGTGCTGTATCTCCAATCAGGATTCTATGCTCCTTGTATACGAATATCATGAAAACCGAAGCCTCGATAGGTGG CTATGCAAGAAGAGTAAGTCATCAGGCATGTCAGGTTCAGTCCACCATGTTGTACTTGATTGGCCAAAGAGATTGAAAATTGCCATTGGAATTGCTCAAG GTTTGTGCTATATGCACCATGATTGTTCACCACCTATTGTTCATAGAGATGTGAAAACAAGCAACATACTTTTGGATGTTCAATTCAATGCAAAAGTTGC TGATTTTGGTTTGGCTAGGATGTTGGTCAAGCCAGAAGAACTTGAGACCATGTCAAATGTTGTTGGCTCATTTGGATATATTGCTCCAGAATATATTAAA ACAACCCGAGTCAGCGAAAAAGTTGATGTCTTCAGCTTTGGTGTTATCTTATTGGAACTGACTACTGGGAAAGAAGCTAACTATGGAGATGAACACTCAT CTCTTGCAGAGTGGGCGTTGCGCCACGTTCAATTAGGAAGCGATATCGATGAACTCCTAGACAAAGATGTAATGGAACTCAGTTATGTGGATGAAATGTG CAGTGCTTTCAAACTTGGGATTATGTGCACTGCAACACTACCTGCTAGTAGGCCTTCCATGAAGGAAGCTGTGCAGATATTGCACCGTTGTGGTGAAGGA TTTACTTTTGCAGAGAGGAATGTTGGGCAGTATGATGCTGTTCCCCTTCTTAAGAATTCAAAAAGGCAGCATAGTTTTGATTTTTCTGATAATGACAGTG GATAATGGAGAGGACGAGTCTTGGATATCACATGTTCAAATCTTAGGAACTGCCTCTCTACTTGTAAGGAATTTAAGAGAGCAGAGAATGAAGCTGAAAA GTATAAGATCTTGGTGCGAATTGGAAGCTTGGTCAAGTTCCTCAAGCGCTAAGCGCACGCGTTTGAAGCACCGAGTGTCCAAGCCAATTTAGTACAGGTG CTCTCTGCCAGTCAAGTGTTTAGTGGTTGATCATGTGCTGGCCCATCAATTAGTGAATCATTTGTTTCTGGTTCTTGAGCACTCATTTCAGATCAACATA AAACCTTAGGTGAAGTTTGTGAGGGGACTTTTTCAGCAGTCATTTTTTGTGACATATGACTGCTTCAAATCCTAATTTCGGGAACCCCTACGTCGTGTGA ATCATACACTAGTGAAAGTTCGCCTTGATCTTCACGAATTCCCGGAGTAGCTTTTGACTTTAAACAAAAAAATGTTCTTCAAGATGTATATTAGGACTGA GGCGGTTAGTTAGTTAGTTATGATTAGTTGAGACAGTTATTAGGCTTAGTTTTTCAGAATTGTTAGCTTTGTAATAACTGAGATATCCTCCTAGTTCTGT TCATTTTTTAGTGAAGTAATAAAACAACTGTTTTTTTCTCCATTTTCATTTCAGTTTCTCTTCTGGCTTGATTGGTTTCTCCATTTATAGTTCTGTTTGC TATTGATCTCTGATACCATGTTTAAATTTAGACGAATCCCG BLAST |
Tissue | pods |
Gene name | LI_gene_178907; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_449869
Blastp | Receptor-like protein kinase 5 from Arabidopsis with 42.91% of identity |
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Blastx | Receptor-like protein kinase 5 from Arabidopsis with 42.73% of identity |
Eggnog | leucine Rich Repeat(COG4886) |
Kegg | Link to kegg annotations (AT4G28490) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458128.1) |
Pfam | Leucine Rich Repeat (PF00560.32) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |