| Id Trinity | TRINITY_DN50673_c4_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_451125 |
| Sequence | GTTTTAATCTCACACAAACACAAACACACACACACATATATATATATATATATACACACATATATATATATATGATTGAAATATTGATTGGTGATTTTGT TATAGGGTCTCACTCTCTCAGCTATAACATTGAGGATCAATGACTATGATGGTGGAAAAGAAGGAGAAGCTTCTGACGGTGGCGCCATTTGAGTGTGCGT GGAGGGAGGATTTGAAGTTCCGGGAGGCTGGCCGCGGCTGCGTGGCGTTCGAGGCTTTCGCCTGCAACGATGTGACATTGGTGTTCCGTGAGAATGTAGG GAGTAGAGGGTACCATTACAAAAGAGATAGCAGCCCTCATTACACAGTTATATTGGGGAGTCATAGGAACAAGAGGCTAAGAATTGAGGTAAATGGAAAA ACTGTTGTTGATGTTGCGGGTGTTGGATTATGTTGTTCTTCAAAGTTTCAGAGTTATTGGATTAGTATCTATGATGGGTTGATTAGCATTGGTAATGGAA AGTACCCTTTTCAAGATGTTGTGTTTCAATGGATGGATTCTAATCCAATTTGTAATGTTCAGTATATTGGGCTTAGTAGTTGGGACAAACATGTTAGGTA TAGAAATGTTAATGTTTTGTCATTGAAACATAGTCTATGGAGGAACATGGGTTTTGGTGATTATGATGTCGATGATGAAGATGAGGTTGATGCAGGGTAT ATGATGGATTATGATAAATGGGGGCTCAGGAATTTTTTGGAAAGTTGGGAGTTATCTGATATGTTATTCATTGTTGGTGTTGAAGAAAAACCTGTACCTG GTCATAAGGCAATTTTAACTGCATCTGGAAACTTCTTCATGTTCTCATCATCTTTTCTCATCAAACTGCCAAATGTTTCTTATGTGACTCTCCATGCATT GCTTCAGTATATCTACACCGGCTGGACCCAGGTTCCGCATGATCAACTTGGTTCTTTGAGGGATTTAAGCCGACAGTTTGAAGTGATGCCACTGTTGAAG CAATGCGAAGAGACTATGGAACGGTTTAAGAAAGATAAGAAGTTGTTTGATATCAACAAGAATGTGGAATTAACATATCCATGCATCCGGCCTCATTGTT CAATTTTGCCCTCGCTTCCTCTCAGCGTCGATAGACTGAGGCAATTGAAACTAACTGGCCAGTACAGCGATGTAAACATTTATATTGAGAATTATGGGCT TGTTGCACAAGCACATAGAATCATTCTCAGCTTATGGAGTATCCCCTTTGCAAAGATGTTCACAAATGGAATGAGTGAAAGCATGTCCACAGAAGTTACC TTAAGGGATGTTCCGCCAGAAGCTTTCAAGGCTATGCTGGAATTTTTATACGATGGCGAATTGAATAACAAAATTATAGAGTCTGGTGCTTTGTTGCTCC AACTCCTTTTATTAGCTGACCAATTTGGAGTGACATTCCTTCACCAAGAATGCTGCAAAATGCTTTTAGAATGTATCTCAGAGGTAGTTTGGTAAACTTA ATAGAAAGTTACACTCGTTTATTCTGTGGATGCCACTTGAATTAACTGATCGGAGAGGAGAATAGCGGTTTCGGACTTCTGAAAACAAAAGAAGAGATCG ATTTTAGAATGATCAATTCTAAGACATCGTTACTTCTCGTCTACATATTATATGCAGGGGTGAAGTTCTTCTATTGTGGAAGGTCATTCAACAGAGTTTT TCTATTATACACATTTAATGGAGAAGATTGCAGACAATTTCAGAAACTGATAGTGTTGTAGCTTTTAAAGCTAACTATTGAACTTTGTTGCAGGACTCAG TATGTCCACTCCTCCAAGTGGTTTCTTCAATCTCGTCATGTAGAGTTATTAAGGAAACACTACAGAGGAGAACTTCCATGAACTTTGACTATTGTATCAG TGCGTGTACTGACTTTGTTTTGTTAGATGAGACAATTTTCGTCAATATCATCAAGGTGTGTCTCTCCTCATGTTGCTCTTTTTTATGTTGAATTTGATGG TAAATCCAAGGGTTGGTGTAACTGTGTAACACAATATCTCCCAAGAGGCCTGCATGTTGATTGTAGTACAAATAATCAGATAAATTTTGCACGTAGGAGG GAATAAAGAATAAGTGGTTGAAGTTATACTTATATGGAATCACAAATATGCTATTGAAGTTAAAAACAGGAGTTTAGTGAAGCATAGAGTTGTTCAACCT TAGAATTGTAGACTAATTTTGAAACACTAAATTTGTCAATGCCAAAAGCCAAAACTTAAAATCCTGTGGAGATATTTTGATTATGATTTTCTGTGCATAA CAAATTGTCTGTACTCTGTACAATAGGTCTTCGGTAAATGTTAGCCCATCTGCCTGACAAATTCTCAATCTATATTTTGATTTTGCAGCATCCAGAATTG ACAGTTACGTCTGAGGAGAAGGTGCTTAATGCAATCCTAATGTATGGCATGAAAGCAAAAGAATTGGTTGGGTGGGAAGTGGTGGACGATTTGATACAAA ATTCAAATCCTGAACTCCTTTTTGGCGAGAGGCTTCAGTTAGTTAATGACTTGTTACCATTTGTGCGGTTTCCGCTACTACAACATGCCTTACTTGAGAA GGTTTGTCGACTATGCATCTCGATGGGTTGTTTACAGCAATAGGATTGACTTATTCTAACTATACCACTATAATTATTTTGTTCAGTTGCAGAATAGCAA CATTGGTCGGCATATTCCTGTTTTTCAGAATCTTGTAAGTTTGCTGTCCCATTCCAATTAAATTGGTTTAGGTGATATGTGTGGTGTGCTTTTGTAAATG TTGTCTTGGAGTAATTTTTCTGTTTTTTTACTTCTTATAGGTTAATGAGGCTCTCATTTCTGTTAAATGTGGACTAGCGAGGCTAGAAAATGAAGAGAAG TAAGTTCTTCATCTTAGTCCATCTCCTACGCTTCTTCATTGGGCCATTAAGTCAGGAGTTACATTTTTGTTGATTAGTGTGTTTTAATTTAAATTGTAGC CTCTCTAGTGGATAATTTGGTAGTGAAAATAATTGCAATCCTATTTTTTGAGGTTATTATGAATCCTGATTCGTTAGTTTGGGGTTATTCTCATTCTTAT TTGGGTGTATAGAAGGGGGTTGTTCTATTTCCTTCTTTGGGCAGAAGTTGAAACACCGCTAGAGTGGGGGCAATAGCAACTTTATTTATTTAAAATTCCA ATTGAGAATGATATTTGTACTTGTGGATAATATTTTCATTACCATTGACACATTGGTGGAATATGGAATAAGAATAATGGTTTCAGAGATGAATATTAGA ATTGTTGAAATATGCCATATTTGTATGGATTCAGGATGTATCATAGTGTAACCATTAGTTGCTTGGCTTCCTAGGATTTTCATAAATTAGGAGCATTTAG GTACTAAGTTGTAGGGTTTGCCTTTTAAGGATTTGTACATGCTTTCAGTTATCGGTTTACATTTTTATTCATATTGAGTTATTTTCTCTGGTATCCCTAT TATCACCCCAAACCTCTTCTCTCTTTCCCCTCCACTGTTGTGTGACATGTATACTAGAAGTTTTAACTTATGCTGGCCTTCCTTGCAGTGTTAGATTCCA ACATAGACGGTCTAGTTACCGGGAGCTCCAGTACATTTGTGACGGGGACGACAGCGGAGTTCTGTACTTCGCAGGCACATCCTACGGTGAACACTCGTCA TGGTTTAATCCTCTTTTGGCAGAGGTAACCATCTGTTTTATTGTTTCTCTCATTCCCTTTTTAGAGTTTTTAATTCGAAGGGCTGATCAATGAACTATTT ATACATGCTGTTCACTAACAAATTTTGTGTCACAGCGAAAGACAATTACCATTACAGCCAGTAGTCCACATGGCAGATACACCGATCCCAAGGTTTTGGC CTCAAGAACTTACCAGGGAACATGTTTTGCTGGGCCTCGATTGGAAAATGGAAATATCAGTTCCTGGTGGATGGTTGATCTCGGGCAAGATCATCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_179026; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_451125
| Blastp | BTB/POZ domain-containing protein At2g30600 from Arabidopsis with 59.3% of identity |
|---|---|
| Blastx | BTB/POZ domain-containing protein At2g30600 from Arabidopsis with 59.08% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AT2G30600) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413234.1) |
| Pfam | Farnesoic acid 0-methyl transferase (PF12248.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |