| Id Trinity | TRINITY_DN50677_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_449354 |
| Sequence | ATCGTTAATAAATTAAAGCTCTCTTGGATATTTTCTGAGATACATGGGAGGGCATTTTCTCTGAGACTCTGCTTCACACTACCTTTGAGACTCTTACCAG AAAATAGAAAATGAGTTTCAGGGAAGACAGCGCCGAAAACAGAGACCTCCAGAAACCGTTCCTCCACACTGGGAGCTGGTACAAATTGGGCACGAGGCAA TCCAGCGTGATGAGTTCAACTCAGGCTATGCGCGACGGCTCTGTTTCCGTTCTCTTTTGTGTCCTCATAGCTGCCTTGGGCCCCATCCAATTCGGTTTCA CGAGTGGGTATTCTTCTCCGACGCAACAGGCTGTAATAAGTGATCTAAATCTGTCAATTTCGGAGTTCTCTCTGTTTGGGTCTTTATCCAATGTTGGTGC AATGGTGGGAGCTATAGCCAGTGGTCAGATAGCCGAGTACGTCGGTCGCAAAGGGTCCTTGATGATTGCTTCCATCCCCAATATAATAGGGTGGCTTGCC ATTTCTTTTGCAAAAGACTCCTCATTTTTATTTATGGGAAGATTGTTAGAAGGTTTTGGCGTTGGGATCATCTCTTATGTGGTGCCTGTTTATATAGCTG AGATAGCACCTCAAAACATGAGAGGTACCCTTGGATCAGTGAACCAGCTCTCTGTCACGATTGGGATAATGATAGCATATGTATTGGGCCTTTTTGTGAA CTGGAGAGTGCTTGCAATTCTAGGTAAATTCTTAATGTTTTTACTTGGTTCAGTTTCTGTGGAAGGACAATGAATCTGTTAATAACCTTGAGGTAACATA TCAGTTTCATTAAGCTTTTAAGAAAAATAGTAGGAACATACTTAGGACATGTGTGTGGAGAGGAAAGGAGCCAAATTTATATAACAGGTCGAACATGGGA GAGGAGTAAATTCGAGTGAAATAGCAAATTTTTTGGGATGATTTGTTTCTTTTACATGTTCTTAAAAATCAGCAGAAATTTTAATAGAAAGCGATCCTCT CAAATCAGGCAAGGAAAGGGGGGGAGGTTGGGGGAAGGAGGACAGGTGGTGGTTCTGAACATTTTTAAAAATGAAAACTATTTTTCATGTTTTTAGAAAT CAATGGAAAGATTGAAAGAAAGCGGCCCTCTCAAGTCTGCTAAGGAAAGGGGGATAGGGGATATGGGGTGTTGTGACTTGTGAATCAGAAGTTCTGAGCG TCTTCTATGAATGGGAGGTTACCTAATTCACAACATTTTTAAAAAAGAAAAACGTTTTTCATGTTCTTGTACTATTAATATATAACCATGATTTTGTTGA ACTTTCTTATATCATTGGGATGAAATGAAACAACTAACAAAATATTATATATCAAAATGGGTGATTGAGAACATTAACATGTGGAGTATAGCATTACTCA ATTTCTGGGTCCAAAATGTTTACAATAATGATGGTCTGTTCTTCTGCAGGAATTTTGCCGTGTACAATATTAATACCTGGATTATTTTTCATACCAGAAT CTCCCAGATGGTTGGTATGGATCACATGTTATGCATTATAATAATTCAAATGTTATACTGTTCATTTCTATTAAAACATATTCTATTTCATGAAATAAAT ATAGGAGGGTAAGATTTCTACTGTTTCTAATTTTCTTTCTTGCGGCTTTTTTTTTCCTTGGTTGGTGTCAAATTGAGGAATATAGGCCAAGATGGGGATG ACAGAGGAATTTGAGAGTTCATTGCAAGTGTTGCGAGGATTTGACACAGATATATCTGTTGAAGTACATGAAATTAAGAGATCTGTGGCATCAACGGGAA AAAGGGCTACAATTCGGTTTGCCGATCTGAAGAGGAAAAGATATTGGTTTCCTTTAATGGTAGGAATTGGATTACTTATACTTCAACAATTGAGTGGTGC CAATGGAGTTTTGTTCTATTCAAGTACCATCTTCGCAAATGCAGGTTTTGCTCTACCTGTCAGCTGTTAAGTTATTTTTTTATAATATAGTTTTTCTTTC CCCTTTTGGGAGGTGGTAGGATCATAGGATGAGAGAAAGGGGATTGCTATTAGATAATCTTGATGGGAGTTTAAACCTTTGAAATATTTACATACCCATG TTTTACATGATACATCATGATTTGAGATATTAGATATTAGCTATAGTTTGGAGGTTGTACTCAATGTGAGACGTTTTATTTGTTTTGTATACATGACTCA GCTGTATTTCTGTGATAATGATGTGTTAACGTAAAGATGGATATATTTTTCATTAGGGTTTCAGAAACTTAGTAGTAGAAACTAATATGAGGCTTAGATG ACAGTTGTAGAAGCTCCATGATTCTAATTTGAAGCTGTTTTGGTTATTTGACTTCCATATTGTAACAGGAATCTCATCCAGCAATATTGCTACATGTGGA CTTGGAGCTATTCAGGTCGCAGCGACTGGAATCTCTACTTGGTTGATGGACAAAAGTGGACGGAGGGTGCTTTTAATAATATCCTCATCTATAATGACAG TTAGCCTTCTCCTTACTTCCATAGCATTCTATCTCGGGGGAATCGTACCTAAGGATTCTGCTCTTTCTAACATTTTGGCATTGCTCTCTGTAGTTGGGGT TGTGGTCATGGTAGTTGGGTTCTCTCTAGGCCTTGGACCAATCCCCTGGATTATAATGTCTGAGATACTTCCTGTGAATATAAAGAGCCTTGCTGGAAGT ATAGCCACCATGGCAAATTGGCTAACTTCATGGGTGATTACTATGACTGCAAACTTGCTTTTGACTTGGAGCAGTGGAGGGACATTCTTAATATACACAG TGGTTGCTGCCTTTACTGTTGCTTTTGTGGCACTATGGGTCCCTGAGACAAAGGGAAGAACATTGGAAGAAATTCAGTTTTCCTTTAGATAGATATGTTT GGGAAAGCATATATAGGTAACCTGTCTTGTGTTTAAAGTAAAGTGGTGTCCCCAACAACATCAAGTATTTATGGTCCTTTGTAACCATTGTGTATTATAT TCTGCAACAAACGGAATTGAAAAAAATAATCAGTGCAACAAGTTTTATTCCAACTGTACAAGCTGATTATTTTTATATATAAACTACTAGGTTACCCATA TATTTGCATAAGTGGCAATGTTATATGAATTTAAACAATGAAAACATTATTCGTTAATGTAGATGTTATTGAGACTTACCTCATGAAAGATTATGTGTAT GTATTTGATTGTTGATGTGGAGTTGTTAATGAAAGATATGGTGTTGAACATGATATATTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_179057; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_449354
| Blastp | Sugar transporter ERD6-like 6 from Arabidopsis with 69.59% of identity |
|---|---|
| Blastx | Sugar transporter ERD6-like 6 from Arabidopsis with 79.61% of identity |
| Eggnog | Transporter(ENOG410XNQK) |
| Kegg | Link to kegg annotations (AT1G75220) |
| CantataDB | Link to cantataDB annotations (CNT0002863) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446727.1) |
| Pfam | Sugar (and other) transporter (PF00083.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |