| Id Trinity | TRINITY_DN50678_c7_g4_i1 |
|---|---|
| Name Transcript | Ll_transcript_449296 |
| Sequence | AGAGATTGAGAAATGGCCATAGAAGCACAATTAGCAAAGTGAGAAATGGCCATGGATGCAACACATGTACTTCACATGAATGGAGGCATTGGAAAATCAA GCTATGCAAACAACTCCTCACTTCAGGTATAATAAGATAACATCATGCTTTCTATATAAATATTCTAGTATCTTAAGGTCTATTTCCGAGTTAAATTTTG AAGGAGAAAGAATAAAAACAACTTGAGAAACATGAAATATACACCTGAAATGACTCAAATGCATTCATTTTTCTTTCTTTCCCTCCAAAAACTAACTCAT AAGTGGAGTCTAAATGATACCATTATCAGAAATATTATGAGTAACCTTTTGCTTACCTATATAGTTTTGTAAGGAATGTTTAAACTCAACTTAATAGTAA GATTGTTTGTGTGATAAAGACTTTTCTTTTGTATTACAAAGGGTATTCTCTTATTTTATGAGTAAGGAATTAATTTCTTTTAGGGTGTGTGACTGTAGTT TCCAATAAGTTTTGCTCCACGGAATCGAACCTTGATGTTTTGGTCTTTCTGAAGCCTTACACCATTAGACGACTTTGTTGTTGTATATATTTTTTTAGGG CAAAACTCCTCTAATATACAGTTTTCGATCTTATTTATTTATGTGATTATTGGTGTATGTGAGTGAATATGTGTTATACAGCAAAAGTCGCTTTCATTGA CAAAGCACATAAGAAAGGAAGCCATTACCAGCCTCTATAGGAGCATGCTTCCGAGATGTTTATCAATTGCAGAATTGGGTTGTGCTTCAGGACCAAATGC TTTCATTGCAGTGTCTGAAATTATCAAGATTGTGGAAAAGCTATGCAAAGAAATGAACCATAAACCTCCAGAGTATATGGTCCTCATGAATGATCTCCCT GGGAATGACTTCAACAACCTCTTCAAGTCCATTAGTAGTTTCAAAGAGAAACTAAGTAATGAAATGGAATCTCAGATTGGTCCATGCTATTTCTATGGAG TTCCTGCTTCTTTCTATGGAAGGATTTTCCCTAATCAAACTTTGCATTTTGTCCATTCCTCTTACAGTCTTCAATGGCTATCTAAGGTTCCAGAGGGTAT AGAGAACAATAAGGGAAATATTTATATGTCCAACACAAGTCCCTTAAACGTTCTGAAGGCTTACTATGAACAATTTCAAAGAGATTTCTCTTTGTTTCTC AAGTGCCGTGCTGAGGAACTAGTTGAAGGAGGATGCATGGTTCTAACAATTGTGGGAAGAAGAAGTGAGAATCGATCTAGTAAAGAATGTTGCTATATTT GGGAGGTTATGGCTAAAGCTCTCAATGACATGGTCTTGCAGGGAATAATAAAGGAAGAGAAATTTGATACTTTCAATATCCCTATTTATAACCCATCCCC ATCTGAAGTAAAATTGGAAGTTCTCAAGGAAGGATCTTTCACCATCAATCGCTTGGAGGTGTCTGAAGTAAAATTCGAATCAGAAAAGTGTGAATCATTC AATGATAGTGGATACAATGTTTCACAATGCATGAGGGCTATAGCTGAACCTATCTGTGTGCATGGGTTGAAAAACCATATAAAAATACGTTTCGGTAGCC GAAAAGGGCAAGTTTGGTATTCTGTCCAAGCCCTTCTCGCTTGGGCGAGCACATCTCGCCTAGGCGAGAACCATCTGTCGCTTGGGCGAGCAAGTCTCGC TTGGGCAAGCTCAATCTCGCTTGGGCGAGTGTTGGGCGAGGATATGTGCTTAGTTTTGGAACTCTGTCGCCCAGGCTCTCGCTTGGGCGAGCAAGGCTTC GCCTGGGCCACAGGAGCCTCGCCTGGGCGAGAATGCCTATGATTTAGAGGCTATTTCTGGGGAATTTCCGCCTGAGCAAAGGGTGTCTCGCTTGGGCGAG AAAGGGGCCTCGCTTGGGTGACAGGGCCTCGCCTGGGCGAGAAAGACCCAAGATTTAAAGGTCTTTTATTTAGATTTGTCGCTTGGGCGACAGTCTCTCG CTTCAGCGAGAGATAGTGTTAAATTTTGAAATTTTTAATGTTCTATTGATAATGTAATGACATATGGATGGGTATATGATATATAAATATTGTGGGATGA GACCATGACTTAGATAAAGAAGTATGGTCCCACAAGAAGTGGATTAATGTCGTTAATTGTTATGCTTGTGCCTTTTAGGACAAGTACCCGACAATGATGT CGTGGATTAGGGTGTTGCCCAAAAAGGGATACATGATACCACATAACGAGATCGTCTGACCATAAGAGGCTTGGTCATGTGACCGTCCAGGATAATTTAG CGATGGATCGTAGTGATAGAGATGTTATCCTTAAGTATTTACGTATTGACGTAATATCGGGTCCCACAAGAAGCATTCCTTTGAGGAGATGTCTTAAGGT TGGGCCAATCAGTTTAATAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_179066; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_449296
| Blastp | Salicylate carboxymethyltransferase from Clarkia with 57.88% of identity |
|---|---|
| Blastx | Salicylate carboxymethyltransferase from Clarkia with 56.19% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AAF00108) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431803.1) |
| Pfam | SAM dependent carboxyl methyltransferase (PF03492.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |