Id Trinity | TRINITY_DN50680_c0_g1_i1 |
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Name Transcript | Ll_transcript_451464 |
Sequence | ATTTGGATTAATTTTGACCACGTCCATTGTATTGTGAAAGCTATTGATTCTTCTTTGAAATAAAATATCTAATAAGATGTGGCGGGAACTTTTGTTAGAT CAATAGCTTCCTCAGTACAACCCTAATTTCAAAACTCTCAACTGCACTATATATCCGACGCTCCCGGCTATTAATTTTCTGCGCCAAACCTGTTTGAAGA AATACCACACTTACCATTTCACACGAAAAACTCAGACTTCTCTCATAGCCGGTTCAGTAAAAAACAGACCGAAAAAATGTACGTGATAAAGAGAGACGGT CGACAAGAACCAGTTCATTTCGACAAAATAACCGCGCGCCTTAAGAAGCTTAGTTATGGTTTGAGCACTGACCACTGCGACGCCGTTTTGGTGTCACAGA AAGTATGTGCAGGCGTTTACAAAGGTGTTACCACCAGTCAACTTGATGAACTCGCCGCTGAAACCGCCGCCGGGATGACTGCTAATCATCCTGATTATGC TTCTTTGGCTGCAAGAATTGCTGTTTCTAATCTGCATAAGAACACGAAGAAATCATTTTCCGAGACGGTTAAATTAATGTACAACCATTTTAATGAAAGA TCTGGGCTAAAGGCTCCATTAATTGCTGATGATGTCTATGAAATCATTATGAAGAATGCGGCTCGTTTGGACAGTGAGATAATCTATGATAGAGATTTTG ACTATGATTATTTTGGTTTCAAAACTCTTGAGAGGTCCTATCTGCTGAAGGTTCAAGGGAAGGTTGTGGAAAGGCCTCAGCATATGCTAATGAGGGTTGC TGTTGGAATTCACAAGGATGACATAGAGTCTGCTCTTAAAACTTACCACATGATGTCCCAACGATGGTTCACCCATGCATCACCCACTCTTTTCAATGCA GGAACACCTAGGCCTCAAATGAGTAGTTGCTTCCTTGTGTGCATGAAAGATGATAGTATAGAGGGTATATATGAAACTTTGAAGGAGTGTGCTGTCATCA GTAAATCAGCTGGAGGAATTGGTGTCTCTGTTCACAACATTCGTGCCACAGGCAGTTACATTCGTGGGACAAATGGGACATCCAATGGCATTATTCCAAT GCTGCGCGTGTTCAATGATACTGCCCGCTATGTTGATCAAGGTGGAGGGAAGAGGAAAGGTGCATTTGCTGTGTACTTGGAACCATGGCATGCTGATATA TTTGAATTCTTGGATTTACGAAAAAATCATGGAAAGGAAGAGAATCGTGCTCGTGATCTGTTTTATGCTCTTTGGGTACCCGATCTCTTTATGGAAAGAG TTCAGAGTAATGGACAATGGTCTTTGTTTTGCCCCAATGAAGCACCAGGTTTGGCAGATTGTTGGGGCGAGGAATTTGAGAAACTTTACCTTCAGTATGA AAGAGAAGGAAAAGGAAAGAAGGTTGTTAAGGCACAGAACCTGTGGTTTGAAATTCTGACATCACAGATAGAAACTGGAACCCCTTATATGCTTTTTAAG GATGCTAGCAATAGAAAAAGTAATCAGCAGAATCTGGGCACAATTAAGTCTTCAAACTTGTGTACTGAGATAATTGAGTATTCAAGTCCAACAGAAACTG CTGTCTGTAATCTGGCATCAATAGCACTCCCACGATATGTAAGAGAAAAGGGTGTGCCAATGGAGTCTCATCCATCTAAAATTGTTGGGAGCATAGATTC TGGAAATCGGTATTTTGACTTCGATAAACTGGCAGAGGTTACCTCGATAATCACAACTAACTTGAATAAAGTAATTGATGTTAATTACTACCCAGTTGAA AGTGCAAAACTGTCAAATTTACGGCACAGGCCCATTGGTATTGGAGTTCAGGGTCTTGCTGATACCTTCATACTACTTGGCATGGCATTTGATTCACCAG AGGCTCAACAGTTAAACAAAGACATATTTGAGACTATATACTATCATGCTCTAAAAGCTTCTTCTGATTTAGCTGAACAAGAAGGCCCCTATGAAACTTA TAGTGGTAGTCCTGTAAGCAAGGGAATTCTTCAACCAGACATGTGGGGTGTGACTCCCTCAAATCGTTGGGATTGGAGTGCACTAAGGGAGATGATATCA AGGAATGGTGTGAGAAATTCACTTCTCGTTGCCCCTATGCCTACTGCATCTACTAGTCAGATTCTTGGTAACAATGAGTGCTTTGAACCATATACTTCAA ATATCTACAGTCGTAGAGTTCTAAGGTTTGCTTTCTCTTCGGATGATATTCTTCTATCTTGATGTATTGTTTTCCTATCTTTTTTTGCTAACTGTTTCTC TCTCAGTGGTGAATTTGTTGTGGTGAACAAGCATCTTCTTAATGACTTGACTGA BLAST |
Tissue | pods |
Gene name | LI_gene_179081; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_451464
Blastp | Ribonucleoside-diphosphate reductase large subunit from Arabidopsis with 88.06% of identity |
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Blastx | Ribonucleoside-diphosphate reductase large subunit from Arabidopsis with 85.12% of identity |
Eggnog | Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (By similarity)(COG0209) |
Kegg | Link to kegg annotations (AT2G21790) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019430219.1) |
Pfam | ATP cone domain (PF03477.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |