Ll_transcript_451475

• Id Trinity: TRINITY_DN50680_c0_g1_i11
• Name Transcript: Ll_transcript_451475
• Sequence: GGAGATACCATTCCTTATAGCAAGAAAAAAACGTGGTCTCACATTTCTACAATCAATCCATCATACACAGCCCACAATAAAGTCTTACACTCCGCCATTT ATTAAAGAAAAACTCCCTCAATTTTAAACTTCAATTTCAAGATTCCAGTGCAAAATCACGCGGGAATTTTTCAAAATTTGAGAGGGAAACAAAGACTTAT CACACATCCAAACACAGACCCCACAAACCCACTACATCCTCTTATATATTAACAACACTATCATCTTATTTTGTGTTGTGCTCCAAAATTGTTTGAAGAA ATTCCCCACTCAAAACAGAAGAAAAAAAATGTACGTGGTGAAGAGGGATGGGAGACAAGAGACAGTGCATTTTGACAAGATCACGGCGCGGCTGAAGAAG TTAAGTTATGGTTTGAGTACCGAACACTGCGATCCGGTTCTGGTGGCACAGAAAGTTTGTGCCGGTGTTTATAAAGGTGTGACAACTAGCCAGCTTGATG AATTGGCAGCTGAAACTGCTGCTGCCATGACCACCAACCACCCTGATTATGCTTCCTTGGCTGCTAGGATTGCTGTTTCAAATCTGCATAAGAACACGAG GAAGTCGTTCTCGGATACGATTAAGATCATGTATGACCATTTTAATAAGAGATCGGGATTGAAGGCTCCTCTGATTGCTGACGACGTCTATGAAATTATC ATGAAGAGTGCTGTTCGGTTGGACAGTGAGATCATATATGATAGGGACTTTGACTATGATTACTTTGGTTTCAAAACCCTTGAGAGGTCCTACCTATTGA AGGTTGAAGGAAAAGTTGTTGAAAGACCTCAGCACATGTTGATGAGGGTTGCTGTTGGAATTCACAAGGATGACATTGATTCTGCTGTCAAAACTTACCA CCTAATGTCTCAGAGATGGTTCACTCATGCATCTCCTACTCTATTCAATGCCGGAACACCTAGGCCTCAGTTGAGTAGTTGCTTCCTTGTGTGTATGAAA GATGATAGTATAGAGGGAATATATGATACTTTGAAGGAGTGTGCTGCAATCAGCAAATCAGCTGGAGGAATTGGTGTTTCTGTTCATAACATTCGTGCCA CAGGCAGTTACATTCGTGGAACGAATGGGACATCCAATGGTATTGTTCCAATGCTCCGTGTGTTCAATGATACTGCCCGCTATGTTGATCAAGGTGGAGG CAAGAGGAAAGGTGCATTTGCTGTTTACTTGGAGCCATGGCATGCTGATATATTTGAGTTCTTGGATTTAAGAAAAAATCACGGAAAGGAAGAGCATCGT GCTCGAGATTTGTTTTATGCCCTTTGGGTGCCTGATCTCTTTATGGAAAGAGTTCAGAGTAATGGACAGTGGTCTTTGTTTTGCCCCAATGAAGCACCAG GTTTGGCAGATTGTTGGGGTGAAGAATTTGAGAAGCTTTACGTTCAGTATGAAAGAGAGGGAAAAGCAAAGAAGGTGGTAGAGGCACAAAATCTCTGGTT TGAAATTCTGAAGTCCCAGATGGAAACCGGAACCCCTTACATGCTTTTTAAGGACTCTTGCAACAGGAAAAGCAACCAGCAGAATCTTGGCACAATTAAG TCATCAAACTTGTGCACTGAGATAATTGAGTATACAAGTCCGACAGAAACGGCCGTTTGCAACCTGGCATCAATTGCACTGCCACGACATGTCAAAGACA AGGGTGTGCCCATGGAGTCCCATCCATCTAAGCTTGTTGGCAGCCGAGGTTCCAAAAGTCGATATTTTGACTTTGATAAACTTGGAGAGGTTACTGCAAC AGTGACAACAAACCTTAATAAAATCATTGATGTTAATTACTACCCAGTAGACAATGCAAGAAGGTCAAACTTAAGGCACAGACCCATTGGTATTGGAGTT CAGGGTCTTGCTGATACCTTCATACTACTTGGCATGGCATTCGACTCACCAGAGGCTGAACAGCTAAACAAGGAGATATTTGAAACTATATACTATCATG CTCTCAAATCTTCTTGTGAATTGGCTGCCAAAGAAGGTCCCTATGAAACATACAGCGGGAGTCCTGTAAGCAAGGGAATTCTTCAGCCAGACATGTGGGG TGTGACACCCTCAAGTCGTTGGGATTGGGACTCACTTCGGAAGATGATATCGAAGAATGGTGTGAGAAATTCACTTCTTGTTGCCCCTATGCCAACTGCA TCTACTAGCCAGATTCTTGGCAATAATGAGTGTTTTGAGCCTTATACTTCTAATATATACAATCGAAGGGTTCTAAGTGGTGAATTTGTTGTTGTGAACA AACATCTTCTTAATGACTTGACTGAAATGGGACTGTGGTCTCCTGCAGTCAAGAACAACATTATCTATGAGAATGGTTCGGTCCAGAAAATCCCAGAGAT ACCTCATGAATTGAAAGCTATATACAAAACTGTTTGGGAGATCAAGCAAAAAACATTAGTTGATATGGCTGTTGATCGAGGATGCTACATAGATCAGAGT CAAAGCTTAAATATTCACATTGAGCAGCCCAACTTTGGAAAACTGACTTCCTTGCATTTCTATGCTTGGTCCAAGGGTCTGAAGACTGGGATGTATTATC TCCGAACACAGGCTGCAGCTGATGCTATCAAGTTCACTGTCGACACCTCTGCCCTCAAAGAAAAACCCAAGGTGTTGGAGGAAGATGATGGTACCAAGAT GGCACAAATGGTGTGTTCTTTGACAAACCGAGATGAGTGTCTGGCTTGTGGGAGTTGAGAGTATCACAAATTTGAATTGCTTCTGATTTTGGGACCAAAG CCCACAAGGGCTAACCTCAGCATTTATTATAAAACGGCTCTACTAGTGAAGATTTAAATACTTGATTAAAAGGCCAATTAATATATGATAATCTTTAGCT ATCTTAGTAAAATATTAGGGCTTTGTATAGTATTTAGACTGGTGTCAGTTTCATTTGTTTTTGCTTCTTGTGTTATATATCTTAGTTGAAGAGTGACAAG AAATCATAGGAGTGCCATGTCAAGTGAATTGCTTTCTTGCCCTTTATGGAAGAAGTAAGAACCGATACCTGATGGTATGATGAAGATGTATTAAAGGTTT TATTGTTACAAAAAACTTGATTAGGGTAAGTATACCCTATTCAAGGTCAGTGAATATTATCTTTCTTAGTGATGTTTTATGTACTTTTGATGTGTAAAGT TATGTAAAATATTATAGCTCATATTCTCAGTCACTGCGAGGCTTGGACAGTTAATGCATTCCCTTACGTCCAGGAGTGTGATACCTAAAACATAAAGTTT ACCTTGTTGATGTATCTTAGCATATTCTAATATCACACTAAAAATAATTTTAG
• Tissue: pods
• Gene name: LI_gene_179081;
• Additional information: details;

Expression of Ll_transcript_451475

FPKM

• PAB: 0.6
• PNAB: 29.3
• PS1: 20.4
• PS2: 7.2
• PS3: 17.1
• PW1: 12
• PW2: 7.5
• PW3: 1.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_451475

• Blastp: Ribonucleoside-diphosphate reductase large subunit from Arabidopsis with 86.03% of identity
• Blastx: Ribonucleoside-diphosphate reductase large subunit from Arabidopsis with 86.03% of identity
• Eggnog: Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (By similarity)(COG0209)
• Kegg: Link to kegg annotations (AT2G21790)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462638.1)
• Pfam: ATP cone domain (PF03477.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;