Ll_transcript_449214

• Id Trinity: TRINITY_DN50688_c0_g1_i5
• Name Transcript: Ll_transcript_449214
• Sequence: TTTACAACCTGATTACATTTATGGTCACTGATGTATTTTATTTCAATTTACTTTAGTCCTATAAATTGCAATTTAAAAAATATATTGAAGGTTGAATGTG ACTTTGTGAATTGTGAGAAGTAAAAAAGAAGAAATTTGGTGCTTTGATTGGATTGGAAGGTAGTGATTGTGATTTAGAACGTGCCCAACATCACTATATT GTATTACACCCCTTCCATGCTTTCACCACTTACAACAACATCCACTGGAATCATCATAATTCTTCATCTCAAACCCTTGTTCATATCTCTGCAACAAAAA AATCATTTTTTGAGAAATGGGTTTTCAAATTCAAGCCATTTAAGAAGTGGGTTTCGAAATTCAAGCAATTTCATTGATGGGTTTTTGAAGAAATCTGAAG AAAACTTATAATGTCGGAAAATGATCAGAATCGTCTTCTGGGGTCGTCGGAAGTTGCGGAGCATGATGTGGAAGCTCAAGCCTCCAACCTCGCCGCCGTC AATGGCGGTGGTAGCCGCAGGGGGTTCATTGATTTGCTTAGATTCTCTGGTCACCGCCACAGTTTCAAGCGTTTAGAGAAAGATGAGGATAGGGAAAGAA GAGATCGTAATAATAACAATCATAATTCTCATTTGGATCTTCATCATGATGATGATGATTTTTCTGGTGATGTGCTCGGAGATAGTGCTCCTCCGGAATG GGTTTTGCTCCTTCTTGGTTGCCTCCTTGGCCTAGCCACTGGACTCTTTGTTGCTGCTTTCAATAAAGGGGTACATCTAATACATGAATGGGCCTGGGCT GGTACTCCAAATGAGGGTGCTGCTTGGCTTCGTTTGCAAAGATTGGCTGATACATGGCATCGAATCCTTTTGATACCTGTCTTTGGAGGAGTCATTGTTG GCATGATGCATGGCTTACTAGAAATACTTGACCAAATAAAGCAGTCTAGTTCCTCTCAAAGGCAAGGTTTTGATTTGCTTTCGGGAGTCTATCCGACAAT AAAGGCTATCCAGGCTGCAGTTACTTTAGGTACCGGCTGTTCTTTGGGTCCTGAAGGTCCTAGTGTTGATATTGGAAAGTCATGTGCCGCTGGATTCTCA TTAATGATGGAAAACAACAGAGAAAGAAAAATAGCACTTGTTGCGGCTGGTGCAGCAGCTGGAATTTCTTCAGGCTTCAATGCAGCAGTTGCGGGTTGTT TCTTTGCTATTGAAACCGTGCTGAGGCCACTTCGTGCAGAGAATTCTCCCCCATTTACAACCGCAATGATTATATTGGCTTCTGTTATCTCATCGACTGT ATCAAATGTTTTACTGGGAACCGAATCAGCTTTTACAGTGCCTGCATATGATCTTAAATCTGCTGCTGAGCTACCTTTATATCTGATATTGGGAATGCTA TGTGGTGTTGTAAGCGTGGCCATGAGTCGTTTGGTTGCTTGGTTCACCAAATTGTTTGAGGTTATCCAGGAGAGATTCGACCTTCCTGCTGTGGTATGCC CTGCTTTAGGTGGTTTAGGAGCTGGGATCATTGCTCTTAAATATCCTGGAATATTGTATTGGGGTTTCACAAATGTGGAAGAAATTCTACATACCGGAAA GAGTGCTTCAGCTCCTGGAATATGGTTGTTGACACAATTAGCAGCTGCAAAGGTTATCGCGACAGCTCTTTGCAAGGGATCTGGACTTGTAGGTGGTCTT TATGCACCGAGTTTAATGATTGGTGCTGCAGTTGGTGCTGTATTTGGAGGGTTTGCAGCTGAAGTTATCAATTCGGCAATTCCTGGAAATGCTGCTGTTG CCCAACCCCAGGCATATGCTCTGGTTGGAATGGCTGCTACATTAGCATCTGTTTGTTCAGTTCCCTTGACGTCAGTTCTACTTCTGTTTGAGCTGACAAA AGATTATAGGATACTGCTTCCTCTCATGGGGGCTGTTGGATTGGCAATATGGGTTCCCTCTGTGACAAACCAGACAAAGGAGAGTGATACATCTGATACA AGAAACATAGCGCGGGGATATTCTTCAATTTCACATGCTGAAGATAATGAAGGTAACTGGAGAGAAGCCAATAACGAGGATGGTTTAGAACTCAGTGTTA TTGAAGATGCTGCTGATCTTGAATTAGTTGATGAGGAACTGCTTCTGGAAAATCTCAAGGTTTATCATGCCATGTCTAAAAATTATCTGAAGGTTTCAAG ACATGCAACCCTGAAAGATGCAATCAAATGCATTCATGATAGCCAGCAGAATTGTGTGCTTGTGGTTGACGAGGATGATTTTCTAGAAGGAATATTGACA TATGGTGACATTAGAAGGTGTATGCCTGAGAATTCTAATGTCACATCCAAGAGTGATTCAAGGCTTGTGGATGACACATGCCTTGTTTCCTCTGTTTGTA CTCGAGGGATGAGCTATCGGGGACGAGAGCGTGGACTTTTAACATGTTACCCAAATACTAGTTTGGCTATGGCCAAAGAGGTAATGGAGGCCAGGGGTAT TAAGCAATTACCAGTGGTTAAACATGGCGTAGATCACATTCGAGAGAGGAAGCGAAGAATCACCGGTCTTCTTCATTATAACGCACTATTGATTTGCCTC AGGAAAGAGATTAATCACAAGTTAGCATATCAAAATAGGACAGAAAACAAGTTGCCTGTGATAACTACAAATGGACATTGACTCAAGGATCAAGCATCTT GGTTGGTCATGTGAACAAAAATAGTGAGCCAGGTTGTAGAATTAAGCTCTCTTTGGTTGCCCAAGTGAAATTGTAGCTGAAAGTTAATACTTGAAGTTAC ATGTATGTTTCAGTGCCTCACAAATGATAAGGAAGTAAATATTTCCAACACTTGGAAGTGTTAAGAATCAACCCTTCTTAATCAACCTGAGATTCTTTTG CATAAATTAGCAAACAGATGAAATTTGACTAAGCTTGAGTATTACCATTACCATATGCCTCTTGTGTATTGAACTAGAAATATTATGATTTTCTTACACT TTTCAAAGAAGAATAAGTTGGTGTAGGGTTTAAGGTTGAGATGAATGTTATCATGTTTGAAAATGAATGAAGATAGAATTGTTCTATGAAAGTAAGATAT GGGTGTGAGTATGACATGAATATAGACAGAATTGTCATATGAAAATTTC
• Tissue: pods
• Gene name: LI_gene_179117;
• Additional information: details;

Expression of Ll_transcript_449214

FPKM

• PAB: 0.3
• PNAB: 1.3
• PS1: 0
• PS2: 0.9
• PS3: 0
• PW1: 0.4
• PW2: 2
• PW3: 2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_449214

• Blastp: Chloride channel protein CLC-f from Arabidopsis with 70.28% of identity
• Blastx: Chloride channel protein CLC-f from Arabidopsis with 75.37% of identity
• Eggnog: chloride channel(COG0038)
• Kegg: Link to kegg annotations (AT1G55620)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440919.1)
• Pfam: Voltage gated chloride channel (PF00654.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;