| Id Trinity | TRINITY_DN50688_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_449216 |
| Sequence | AACCAAAGAACAAAGCACATTTTCGTGTTTCAATTGTGAAAAGTGCAAAAGCAGGGAAAGGAGAATGTTGATTGTGACTTCGTGAGAACTAAGAAAGAAG CATAAACGGTAGTGCTTTGATTCTATTGGATTGTTGGGTAGTGATTCAGATTTTGAACGTGCGCAACACTATTGCATTACGTCTCAACAAGATCCATTTG AATCATAATCATTCTTCATCACAAACCCTTGAATCTAAAGAAAAAAGCAATTTTGAAAAATTGGTTTTGTAATTCAAGCCATTTAAGACGTGGGTTTCGA AATTCAAGCCAGTTCGTTGATGGGTTTTTAAATTGAAGCCATTCCATTGATGGGTTTTTGAAGGAATCTGAAGAATTTTTTTTTCAATGTTGGAAAGCGA TCAGAATCGTCTTCTGGGTTCGTCGGAAGATGCGGAGCACGACGTGGAAGCTCAAACATCCGAAATCAATGGCGGAAGAGGGTTGAGGGATTTGCTTAGA TTGAAAAGGTTAGAGAAAGAAGGAGAAATAAGAGATCGAAATAGTTATAATCATAATCATAATTCACATTCGCATATGGATCTTCATGATGATGATGATT CTTCGCTTGGAGATAGTGCACCTCCTGAATGGGTATTGCTCCTTCTTGGTTGCCTCCTTGGTCTTGCGACTGGACTCTTTGTTGCTGCTTTCAATAAAGG GGTACATCTAATACATGAATGGGCCTGGGCTGGTACTCCAAATGAGGGTGCTGCTTGGCTTCGTTTGCAAAGATTGGCTGATACATGGCATCGAATCCTG TTGATTCCTGTGTTTGGAGGAGTCATTGTTGGAATGATGCATGGCTTACTGGAAATACTTGACCAAATAAAGCAGTCCAGTTCCTCTCAAAGACAAGGTT TAGACTTGCTTTCAGGAGTCTATCCAACAATAAAGGCTATCCAGGCTGCAGTTACTTTAGGCACTGGCTGTTCTTTGGGTCCTGAAGGTCCTAGTGTTGA TATTGGAAAGTCATGTGCGACTGGATTTTCATTAATGATGGAAAACAACAGAGAAAGGAAAATAGCACTTGTTGCAGCCGGTGCAGCAGCTGGAATTTCT TCAGGTTTCAATGCAGCAGTTGCTGGTTGTTTCTTTGCTATTGAAACTGTGCTGAGGCCACTTCGTGCAGAGAACTCTCCCCCATTTACAACTGCCATGA TTATATTAGCATCTGTTATCTCATCAACTGTATCAAATGTTTTACTGGGAACTGAATCAGCTTTTACAGTGCCTGCATATGATCTTAAATCTGCTGCTGA GCTACCTTTATACCTGATTTTGGGAATGCTATGTGGTGTTGTAAGCGTGGCCATGAGTCGTTTGGTTGCTTGGTTCACCAAATTGTTTGAGCTTATCCAG GAAACATTTGATCTTCCTACCGTGGTATGCCCTGCTTTAGGTGGTTTAGGAGCTGGGATCATTGCTCTTAAATATCCTGGAATATTGTATTGGGGTTTCA CAAATGTGGAAGAAATTCTACATACAGGAAAGAGTGCTTCAGCTCCGGGAATATGGTTGTTGGCTCAATTGGCAGCTGCAAAAGTTATCGCGACAGCTCT TTGCAAGGGATCTGGACTTGTAGGTGGTCTTTATGCACCGAGTTTAATGATTGGTGCTGCAGTTGGTGCTGTATTTGGAGGGTTTGCAGCTGAAGTTATC AATTCGGCAATTCCTGGAAATGCTGCTGTTGCCCAACCCCAGGCATATGCTCTGGTTGGAATGGCTGCTACATTAGCATCTGTTTGTTCAGTTCCCTTGA CGTCAGTTCTACTTCTGTTTGAGCTGACAAAAGATTACAGGATATTGCTTCCTCTCATGCATTTTGTAATATCCAGAACTTGTGAGCAGTGGTGTTTTAA GAACCCGAGAACAGGAGGTGCAAATTGCATTGAATTGTCCAAAATGTATCAGAATAGGACAAATGGAGTGACATGGGTGCAATTATATATATCCGGGGGT GCAAACAATATTAACTATAAGGGCAATGTATAATTTTTTCCAGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_179117; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_449216
| Blastp | Chloride channel protein CLC-f from Arabidopsis with 75.66% of identity |
|---|---|
| Blastx | Chloride channel protein CLC-f from Arabidopsis with 89.71% of identity |
| Eggnog | chloride channel(COG0038) |
| Kegg | Link to kegg annotations (AT1G55620) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421073.1) |
| Pfam | Voltage gated chloride channel (PF00654.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |