Id Trinity | TRINITY_DN50689_c0_g1_i10 |
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Name Transcript | Ll_transcript_450303 |
Sequence | CCTAACCCCACGTGTTTGTGTCAACACCAATCTCAACAACTCTCTCTCTCTCTCTCTACAAAACAAAAACCCAAACTTTAAAACCATTTTCTCATTCCCC ATTTTCTCCGCCAATCTTATTCTCTCTCTTCAATGGCTTCCACTTCCTCTCTCACTCTCTCCCAATCTCTCCTCTTCCCCAAACCCACCTCCCTCAAACC CTCTTCCTACTCTCTCTCCCTCCCCACCAACAATGGGTTCTCCTCAAAATCCTCTCTTTCCTCTTCCTCCCTCCGCCGCCGCCCCATCACCGCCTCCGCC GCACCCACCACCGAGCCAACAACAACCCTTGTTGATAAATCAGTGAACTCGATCCGGTTCCTGTCCATTGATGCGGTGGAGAAGGCGAATTCTGGCCACC CTGGTCTTCCAATGGGGTGTGCTCCAATGGGTCATATATTGTATGATGAAGTTATGAAGTATAATCCTAAGAACCCTAAATGGTTCAACCGGGATCGTTT TGTGTTATCTGCTGGTCATGGTTGTATGCTTCAATATGCTTTGCTTCATCTTGCTGGTTATGATAGTGTTAAGGTTAGTGAGGAATTATGGAACTTTGTT TTGGTGATGAATAGTTTAAGAGTTATTGGATTTTGTATTCAGTTATAATTTGTTATTATTCAAAAGTTGACCAAATTTGTTTCCTCAGTTTTTTATGTTC TTTTAACTGCCTATTTGTGCTTGAAGCATAACCGATCCGAAGTCTCAATAAAAGGCGAAGGTTGTGTTAACGTAAAATTTGTCTGAGTCTATATGACATT GTGTGTGAATTTAGTTGTGATGCATTGTCAACCTAAAAGTTATGTATATTATCAACCAATTATACAATGAT BLAST |
Tissue | pods |
Gene name | LI_gene_179118; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_450303
Blastp | Transketolase-2, chloroplastic from Arabidopsis with 62.94% of identity |
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Blastx | Transketolase, chloroplastic from Solanum with 92.68% of identity |
Eggnog | Transketolase(COG0021) |
Kegg | Link to kegg annotations (AT2G45290) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019460699.1) |
Pfam | Transketolase, thiamine diphosphate binding domain (PF00456.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |