Id Trinity | TRINITY_DN50689_c0_g1_i17 |
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Name Transcript | Ll_transcript_450311 |
Sequence | CCCACCGCCACCCACCGCCGCCTCACCACCCTCCACCACCGCCGCATCACTCCCATCAGAGCCTCCGCCGCCGTCGAGACCCTGAACAAACCCACCGCGG ATTTGTCCCTTGTGGAGAAATCGGTGAACACGATCCGTTTTCTTGCAGTGGATGCTGTTGAAAAAGCGAACTCGGGTCACCCAGGTTTACCAATGGGGTG TGCACCAATGGGTCATGTTCTATATGATGAAGTGATGAGGTATAACCCAAAGAACCCTTATTGGTTTAACCGTGATCGTTTTGTTCTTTCTGCTGGACAT GGATGTATGCTTCAGTATGCGTTACTTCACCTTGCTGGATATGATAGCGTTAAGGAAGAAGATTTAAAGCAATTCCGCCAATGGGAGAGCCGGACCCCAG GACACCCTGAGAACTTTGAGACGCCTGGGATTGAAGTCACAACAGGTCCTCTTGGTCAGGGCATTGCCAATGCTGTTGGTTTGGCGCTTGCGGAGAAGCA CTTGGCTGCAAGATATAACAAGCCTGACAATGAGATTGTTGACCATTACACGTATGCTATACTTGGTGATGGTTGTCAAATGGAGGGAATTGCAAATGAG GCATGTTCACTTGCTGGTCACTGGGGACTGGGGAAGCTAATAGCATTTTATGATGACAATCACATTTCTATTGATGGTAACACGGAGATTGCATTTACTG AGAATGTTGATAGTCGTTTTGAGGGACTAGGATGGCATGTTATTTGGGTAAAGAATGGAAACAATGGCTATGATGAAATTCGTGCTGCCATTAAGGAAGC AAAAGCTGTCAAAGACAAACCAACATTGATCAAGGTCACAACAACCATTGGTTTTGGTTCTCCTAACAAGGCCAACTCCTACAGTGTGCATGGAAGTGCA CTGGGTGCCAAGGAAGTAGATGCCACTAGGAATAACCTTGGATGGCCATATGAGCCTTTCCACGTGCCCGAGGATGTCAAAAAGCATTGGAGTCGCCACA TTCCTGAGGGTGCTGCACTTGAAACTGAGTGGAATGCTAAGTTTGCGGAATATGAAAAGAAATACAAAGATGATGCTGCAGTTCTGAAGTCCATTATTAG TGGTGAATTACCGGCTGGTTGGGAGAAAGAACTTCCGACATATACTCCAGAGACCCCAGCCGATGCCACCAGAAATCTGTCTCAGCACAACCTTAATGCC CTTGCAAAGGTTCTTCCTGGTCTGCTTGGAGGCAGTGCTGATCTTGCATCTTCCAACATGACCTTGTTGAAGGCATTTGGGAACTTCCAAAAGGATACTC CAGAAGAGCGTAATCTTAGATTTGGTGTCAGAGAACATGGAATGGGAGCAATCTGCAATGGCATTGCTCTTCACAGCCCTGGACTGATTCCTTACTGTGC AACTTTCTTTGTTTTCACCGACTACATGAGAGGCGCCATAAGACTCTCTGCCCTTTCCGAGGCCGGAGTTATTTACGTTATGACCCATGATTCAATAGGA CTTGGAGAGGATGGTCCAACCCACCAGCCAATAGAGCACTTGGCAAGCTTCCGGGCAATGCCAAATATTTTGATGCTTCGTCCTGCTGATGGTAATGAAA CTGCTGGAGCATACAGAGTTGCTGTCCTTAACAGGAAGAGACCCTCTATCCTCGCACTTTCTCGACAAAAATTGCCCAATCTTCCCGGAACTTCTATTGA AGGAGTTGAAAAGGGTGGATACACCATTTCAGACAACTCATCAGGTAACAAGCCTGATGTCATTTTGATTGGAACTGGTTCCGAGTTGGAAATTGCTGCC CAAGCTGCCGATGATCTAAGAAAGGAAGGGAAAGCCGTTAGAGTTGTTTCCTTTGTTTCCTGGGAGCTTTTCGATGAGCAATCAGATGCTTACAAGGAGA GTGTTCTACCCGCTTCTGTATCAGCTAGAGTTAGCATTGAGGCCGCATCAACTTTCGGATGGGCGAAAATTGTTGGAAGCAAGGGAAAAGCAATAGGCAT TGATGGTTTTGGAGCTAGTGCACCAGCTGGAAGAATATACAAAGAATTTGGTATCACTAAAGAAGCTGTTATTGCTGCAGCCAAAGAACTTATCTAGATA TATTAGTTTCTTACTCAATTAGAACTTGTGATTTTGGATTGTGATTTGCATAGATGAGAATCTGCAGGGGATGTGTTTCAAGAGCAATATCCTTTGCTTG AATAAGGAATGATTAAATTGTGGCTTCTTGGCATTCTCATTGAAGCAAACATTGATCAAAGTAAGAGTGGTGATTTTTATGAACTTGCAATAACACTTGC CTGTGGAATTTTGTATTGCCACATTGTTAAATTCATTCAATGATGTTCATGATTTTCCATATAGTCCTTGTACAACTATGCTAGAATTTTATGTTCCATT GATTGGCACTATACAATCACCCATTAAGGATAGATTATCTTCAAGAATATCTTAAAATTAGATTAACTAAGTTGTATTTCCA BLAST |
Tissue | pods |
Gene name | LI_gene_179118; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_450311
Blastp | Transketolase, chloroplastic from Solanum with 86.41% of identity |
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Blastx | Transketolase, chloroplastic from Solanum with 88.07% of identity |
Eggnog | Transketolase(COG0021) |
Kegg | Link to kegg annotations (102591899) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463437.1) |
Pfam | Transketolase, thiamine diphosphate binding domain (PF00456.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |