Ll_transcript_450294

• Id Trinity: TRINITY_DN50689_c0_g1_i3
• Name Transcript: Ll_transcript_450294
• Sequence: CCTAACCCCACGTGTTTGTGTCAACACCAATCTCAACAACTCTCTCTCTCTCTCTCTACAAAACAAAAACCCAAACTTTAAAACCATTTTCTCATTCCCC ATTTTCTCCGCCAATCTTATTCTCTCTCTTCAATGGCTTCCACTTCCTCTCTCACTCTCTCCCAATCTCTCCTCTTCCCCAAACCCACCTCCCTCAAACC CTCTTCCTACTCTCTCTCCCTCCCCACCAACAATGGGTTCTCCTCAAAATCCTCTCTTTCCTCTTCCTCCCTCCGCCGCCGCCCCATCACCGCCTCCGCC GCACCCACCACCGAGCCAACAACAACCCTTGTTGATAAATCAGTGAACTCGATCCGGTTCCTGTCCATTGATGCGGTGGAGAAGGCGAATTCTGGCCACC CTGGTCTTCCAATGGGGTGTGCTCCAATGGGTCATATATTGTATGATGAAGTTATGAAGTATAATCCTAAGAACCCTAAATGGTTCAACCGGGATCGTTT TGTGTTATCTGCTGGTCATGGTTGTATGCTTCAATATGCTTTGCTTCATCTTGCTGGTTATGATAGTGTTAAGGAAGAAGATTTGAAGGAATTCCGCCAA TGGGGTAGCAGAACCCCTGGACATCCGGAGAACTTTGAGACCCCTGGAGTTGAAGTGACAACAGGACCACTTGGTCAGGGTATTGCCAATGCGGTTGGTT TGGCCCTAGCAGAGAAGCACTTAGCTGCTAGATTTAACAAGCCTGACAACGAGATAATTGATCATTACACATATGCTATACTCGGTGATGGTTGTCAAAT GGAGGGGATTGCAAATGAAGCATGCTCACTTGCTGGCCACTGGGGACTGGGGAAGCTAATAGCTTTTTATGATGACAATCACATTTCAATTGACGGAAAC ACGGAGATTGCATTTACTGAGAGCGTAGATAGTCGTTTTGAGGGACTAGGGTGGCATGTTATTTGGGTAAAGAATGGAAACAATGGCTATGATGAAATTC GTGCTGCCATTAAGGAAGCAAAAGCGGTCAAAGACAAGCCCACACTCATAAAGGTAACAACAACAATCGGTTTTGGTTCTCCGAACAAGGCTAACTCCTA CAGTGTGCATGGAAGTGCACTTGGTGCAAAAGAAGTTGATGCCACAAGGAATAACCTTGGATGGCTACATGAGCCTTTCCAGGTGCCTGAGGAAGTCAAA AAGCATTGGAGTCGCCACATTCCTGAGGGTGCTGCACTTGAAACTGAGTGGAATGCTAAGTTTGCGGAATATGAAAAGAAATACAAAGATGATGCTGCAG TTCTGAAGTCCATTATTAGTGGTGAATTACCGGCTGGTTGGGAGAAAGAACTTCCGACATATACTCCAGAGACCCCAGCCGATGCCACCAGAAATCTGTC TCAGCACAACCTTAATGCCCTTGCAAAGGTTCTTCCTGGTCTGCTTGGAGGCAGTGCTGATCTTGCATCTTCCAACATGACCTTGTTGAAGGCATTTGGG AACTTCCAAAAGGATACTCCAGAAGAGCGTAATCTTAGATTTGGTGTCAGAGAACATGGAATGGGAGCAATCTGCAATGGCATTGCTCTTCACAGCCCTG GACTGATTCCTTACTGTGCAACTTTCTTTGTTTTCACCGACTACATGAGAGGCGCCATAAGACTCTCTGCCCTTTCCGAGGCCGGAGTTATTTACGTTAT GACCCATGATTCAATAGGACTTGGAGAGGATGGTCCAACCCACCAGCCAATAGAGCACTTGGCAAGCTTCCGGGCAATGCCAAATATTTTGATGCTTCGT CCTGCTGATGGTAATGAAACTGCTGGAGCATACAGAGTTGCTGTCCTTAACAGGAAGAGACCCTCTATCCTCGCACTTTCTCGACAAAAATTGCCCAATC TTCCCGGAACTTCTATTGAAGGAGTTGAAAAGGGTGGATACACCATTTCAGACAACTCATCAGGTAACAAGCCTGATGTCATTTTGATTGGAACTGGTTC CGAGTTGGAAATTGCTGCCCAAGCTGCCGATGATCTAAGAAAGGAAGGGAAAGCCGTTAGAGTTGTTTCCTTTGTTTCCTGGGAGCTTTTCGATGAGCAA TCAGATGCTTACAAGGAGAGTGTTCTACCCGCTTCTGTATCAGCTAGAGTTAGCATTGAGGCCGCATCAACTTTCGGATGGGCGAAAATTGTTGGAAGCA AGGGAAAAGCAATAGGCATTGATGGTTTTGGAGCTAGTGCACCAGCTGGAAGAATATACAAAGAATTTGGTATCACTAAAGAAGCTGTTATTGCTGCAGC CAAAGAACTTATCTAGATATATTAGTTTCTTACTCAATTAGAACTTGTGATTTTGGATTGTGATTTGCATAGATGAGAATCTGCAGGGGATGTGTTTCAA GAGCAATATCCTTTGCTTGAATAAGGAATGATTAAATTGTGGCTTCTTGGCATTCTCATTGAAGCAAACATTGATCAAAGTAAGAGTGGTGATTTTTATG AACTTGCAATAACACTTGCCTGTGGAATTTTGTATTGCCACATTGTTAAATTCATTCAATGATGTTCATGATTTTCCATATAGTCCTTGTACAACTATGC TAGAATTTTATGTTCCATTGATTGGCACTATACAATCACCCATTAAGGATAGATTATCTTCAAGAATATCTTAAAATTAGATTAACTAAGTTGTATTTCC A
• Tissue: pods
• Gene name: LI_gene_179118;
• Additional information: details;

Expression of Ll_transcript_450294

FPKM

• PAB: 5.1
• PNAB: 55.1
• PS1: 33.4
• PS2: 23.3
• PS3: 30.7
• PW1: 33.8
• PW2: 21
• PW3: 22.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_450294

• Blastp: Transketolase-2, chloroplastic from Arabidopsis with 81.67% of identity
• Blastx: Transketolase, chloroplastic from Solanum with 88.35% of identity
• Eggnog: Transketolase(COG0021)
• Kegg: Link to kegg annotations (AT2G45290)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460699.1)
• Pfam: Transketolase, thiamine diphosphate binding domain (PF00456.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;