Ll_transcript_450297

• Id Trinity: TRINITY_DN50689_c0_g1_i5
• Name Transcript: Ll_transcript_450297
• Sequence: CCCACCGCCACCCACCGCCGCCTCACCACCCTCCACCACCGCCGCATCACTCCCATCAGAGCCTCCGCCGCCGTCGAGACCCTGAACAAACCCACCGCGG ATTTGTCCCTTGTGGAGAAATCGGTGAACACGATCCGTTTTCTTGCAGTGGATGCTGTTGAAAAAGCGAACTCGGGTCACCCAGGTTTACCAATGGGGTG TGCACCAATGGGTCATGTTCTATATGATGAAGTGATGAGGTATAACCCAAAGAACCCTTATTGGTTTAACCGTGATCGTTTTGTTCTTTCTGCTGGACAT GGATGTATGCTTCAGTATGCGTTACTTCACCTTGCTGGATATGATAGCGTTAAGGAAGAAGATTTAAAGCAATTCCGCCAATGGGAGAGCCGGACCCCAG GACACCCTGAGAACTTTGAGACGCCTGGGATTGAAGTCACAACAGGTCCTCTTGGTCAGGGCATTGCCAATGCTGTTGGTTTGGCGCTTGCGGAGAAGCA CTTGGCTGCAAGATATAACAAGCCTGACAATGAGATTGTTGACCATTACACGTATGCTATACTTGGTGATGGTTGTCAAATGGAGGGAATTGCAAATGAG GCATGTTCACTTGCTGGTCACTGGGGACTGGGGAAGCTAATAGCATTTTATGATGACAATCACATTTCTATTGATGGTAACACGGAGATTGCATTTACTG AGAATGTTGATAGTCGTTTTGAGGGACTAGGATGGCATGTTATTTGGGTAAAGAATGGAAACAATGGCTATGATGAAATTCGTGCTGCCATTAAGGAAGC AAAAGCTGTCAAAGACAAACCAACATTGATCAAGGTCACAACAACCATTGGTTTTGGTTCTCCTAACAAGGCCAACTCCTACAGTGTGCATGGAAGTGCA CTGGGTGCCAAGGAAGTAGATGCCACTAGGAATAACCTTGGATGGCCATATGAGCCTTTCCACGTGCCCGAGGATGTCAAAAAGCATTGGAGTCGCCACA TCCCTGAGGGTGCTGCACTTGAAGCTGAATGGAATGCTAAGTTTGCTGAATATGAGAAGAAATACAAGGAGGAAGCTACAGAGCTGAAGTATATTATCAG TGGTGAATTCCCTGCTGGTTGGGAGAAAGCACTTCCGACATACACTCCAGAGATCCCTGCTGATGCTACAAGAAATCTGTCTCAGCAAAATCTGAATGCC CTTGTTAAGGTTCTTCCTGGTCTGATTGGTGGCAGTGCAGATCTTGCCTCTTCCAACATGACCTTATTGAAATCGTTTGGTGATTTCCAAAAGGATACAC CTGAAGAGCGCAATGTTAGATTTGGTGTTAGAGAACACGGAATGGGAGCAATTTGCAATGGTATTGCTCTTCACAGCCCTGGATTCATTCCGTACTGTGC AACTTTCTTTGTCTTCACTGACTACATGAGAGCTGCCATCAGGATTTCTGCCCTGTCTGAAGCTGGAGTTATTTATGTGATGACTCATGATTCGATTGGA CTTGGCGAGGATGGGCCAACTCATCAGCCGATAGAGCACTTGGCAAGCTTCCGAGCAATGCCAAACATCCTTATGCTTCGTCCAGCTGACGGTAATGAAA CTGCTGGATCATACAAGGTTGCTGTGGTCAACAGGAAGAGACCCTCAATTATTGCACTTTCGAGGCAAAAGTTGCCTAACCTCCCAGGAACTTCTATTGA GGGAGTTGAAAAGGGTGGCTACACCATATCCGATAACTCATCAGGTAACAAGCCTGATGTTATTTTGATTGGAACTGGTTCTGAGTTGGAAATTGCTGCG GCCGCTGCCGAGGATCTAAGGAAGGAAGGGAAAGCTGTTAGAGTTGTTTCTTTTGTTAGCTGGGAACTTTTTGATGACCAATCAGATGAATACAAGGAGA GTGTTCTCCCTGCTGCTGTAACAGCTAGAGTTAGTATTGAGGCTGCAACAACATTTGGCTGGGCAAAGATTGTCGGAAGTAAGGGAAAAGCAATCGGCAT TGATCGATTCGGAGCCAGTGCTCCGGCAGGAAAAATATACAAGGAGTTTGGTATCACCAAGGAAGCTGTTATTGCTGCTGCAAAAGAACTTTCCTAGATA TATTTTTTCCTTCTTTTATTCAGAACTTGTAAGTTTCACTGGTGGCATATTACATATCTGTTGCTTGATAAATCACCTTAGCCACAATAAGGAAGATTAG ATTGGTCTTGCATATGATAATCAGAGGAGAAACATAAAGTAAAGGATGAGTTGAATTGAAGAAGTTGTATGAATTTGTAACAACTATTTTGAGTGGTGAA TTTTGCACTATGATGTAGTTGAATTCAGTGAATCTGTTAATAAATTCACAAATATAAAATGAAGCATATGCTGGTGTACATTTTGATAAAAAGAATAAGT TTATCCACACATATCACAGTAAGACTAATTTCAAGTAACTTTTTTTATTTGTATTTTAAGGGTAAAAGTGTAATATTATTCTAAATAAAAATGATATAAC
• Tissue: pods
• Gene name: LI_gene_179118;
• Additional information: details;

Expression of Ll_transcript_450297

FPKM

• PAB: 8.8
• PNAB: 29.6
• PS1: 9.2
• PS2: 15.2
• PS3: 11.1
• PW1: 9
• PW2: 24.8
• PW3: 22

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_450297

• Blastp: Transketolase, chloroplastic from Solanum with 85.71% of identity
• Blastx: Transketolase, chloroplastic from Solanum with 87.35% of identity
• Eggnog: Transketolase(COG0021)
• Kegg: Link to kegg annotations (102591899)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463437.1)
• Pfam: Transketolase, thiamine diphosphate binding domain (PF00456.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;