Ll_transcript_450299

• Id Trinity: TRINITY_DN50689_c0_g1_i7
• Name Transcript: Ll_transcript_450299
• Sequence: GAAACTTATTGCTTTCTATGATGATAACCACATTTCCATTGATGGTGACACTGAAATTGCATTCACTGAAAGTGTCGATAAACGTTTTGAGGGACTTGGG TGGCATGTAATTTGGGTAAAGAATGGAAATACCGGCTATGATGAAATTCGTGCAGCCATTAAGGAAGCAAAGGCTGTCACAGACAAGCCCACTTTGATCA AGGTAACCACTACCATTGGATACGGCTCTCCAAACAAGTCTAACTCCTACAGTGTTCATGGAAGTGCATTAGGTGCTAAAGAAGTGGATGCTACAAGGAA GAATCTTGGATGGCCATATGAGCCTTTCCATGTGCCTGAAGATGTTAAAAAGCATTGGAGTCGCCACACCCCCGAGGGTGCTGCACTTGAAGCTGAGTGG AATGCTAAGTTTGCAGAATACGAAAAGAAATACAAGGAGGAAGCTGCAGAGCTGAAGTCTCTTATCAATGGTGAATTACCTGCTGGTTGGGAGAAAGCAC TCCCGGTGAGTAAAATTCCTAACTTTCTTGGTTGGTCGTTATAATTATGTGGAGGTGAGTAACTCTATATGGTTTGGATTATGTATTACCCGAATTTTAT CACGAATTTGATGTCAGAGAGTATCATGCTTTGATAACCTGTTATTTAAATTTGATCACGCCCTTTACTTACTGTTTGTATGGCAGTACAATCTTTAAAA TGTTATTTGAATTTCACAATAACAAAACCGACTCCAAATAATTGTGCCTAGAATATTGATAAATGATCATTCTCCCAATTTGATTTCAGACATACACTCC AGAGATCCCAGGCGATGCCACCAGAAATTTGTCTCAACATAACCTTAATGCCCTTGCTAAGGTTCTTCCAGGTCTGCTTGGAGGTAGTGCGGATCTTGCG TCTTCCAACATGACCTTGCTGAAAATGTTTGGAAACTTTCAAAAGGATACTCCAGCAGAGCGTAATATTAGATTCGGTGTTAGAGAACATGGAATGGGGG CAATCTGCAACGGCATTGCTCTTCACAGCCCGGGACTGATTCCTTATTGTGCAACTTTCTTTGTTTTCACTGACTACATGAGAGGTGCCATAAGACTTTC TGCCCTGTCTCAGGCTGGGGTTATTTATGTTATGACCCATGATTCAATAGGACTCGGAGAGGATGGGCCAACCCACCAGCCGATAGAGCACCTGGCAAGC TTCCGGGCAATGCCAAATATTTTGATGTTGCGTCCCGCTGATGGTAATGAAACTGCTGGAGCATACAAAGTTGCTGTGCTTAACAGGAAGAGACCCTCCA TCCTTGCTCTCTCCCGGCAAAAGTTGCCCAACCTTCCCGGATCATCTATTGAAGGAGTTGAAAAAGGTGGATACATCATTTCAGACAACTCAACAGGCAA CAAGCCTGATGTCATTCTGATCGGAACCGGTTCTGAATTGGAAATTGCAGCCAAAGCTGCCGATGATCTACGGAAGGAAGGGAAGGCTGTTAGAGTTGTT TCCTTTGTTTCATGGGAACTTTTTGACGAGCAATCAGAATCCTACAAGGAGAGCGTTCTTCCTGCTGCTGTTTCAGCTAGAGTTAGCATTGAGGCCGGGA CAACATTTGGGTGGGAGAAAATTGTTGGAAGCAAGGGAAGAGCAATAGGCATCGATCATTTTGGAGCTAGTGCTCCAGCCGGAAAAATATACAAAGAGTT CGGTATCACCAAGGAAGCTGTTATAGCTGCAGCAAAAGAGCTTATCTAGATGTGTTGGTTTATGGTCATTTAGAACTTCTGATATTTCTTTTTCCTGGTT TTGGTTTGATATTACACTAGAGTTGGAAAGTGCATGTTATCTGTTTCAAAAGCATTCCTTTGCTTGAATAAGAGAAGAAGTGTTAAAAGTAATGAATTTT TCTGAACTTGTAATAACTTTCACAGTTGAGTTGTATATTTCCACATGGTTAATTTGGTGTTCATGATCATCCATTTGTTCCATCCTTAGGTATGAAAGTG TATTTCTTTGACAGTAAGAAAAATTAGAAGGAAACAACTAAGCAAAC
• Tissue: pods
• Gene name: LI_gene_179118;
• Additional information: details;

Expression of Ll_transcript_450299

FPKM

• PAB: 0.6
• PNAB: 0.6
• PS1: 0.6
• PS2: 0.1
• PS3: 0.6
• PW1: 0.2
• PW2: 0.4
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_450299

• Blastp: Transketolase, chloroplastic from Craterostigma with 87.46% of identity
• Blastx: Transketolase, chloroplastic from Craterostigma with 88.4% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463437.1)
• Pfam: Transketolase, pyrimidine binding domain (PF02779.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;