Ll_transcript_450301

• Id Trinity: TRINITY_DN50689_c0_g1_i9
• Name Transcript: Ll_transcript_450301
• Sequence: GAAACTTATTGCTTTCTATGATGATAACCACATTTCCATTGATGGTGACACTGAAATTGCATTCACTGAAAGTGTCGATAAACGTTTTGAGGGACTTGGG TGGCATGTAATTTGGGTAAAGAATGGAAATACCGGCTATGATGAAATTCGTGCAGCCATTAAGGAAGCAAAGGCTGTCACAGACAAGCCCACTTTGATCA AGGTAACCACTACCATTGGATACGGCTCTCCAAACAAGTCTAACTCCTACAGTGTTCATGGAAGTGCATTAGGTGCTAAAGAAGTGGATGCTACAAGGAA GAATCTTGGATGGCCATATGAGCCTTTCCATGTGCCTGAAGATGTTAAAAAGCATTGGAGTCGCCACACCCCCGAGGGTGCTGCACTTGAAGCTGAGTGG AATGCTAAGTTTGCTGAATATGAGAAGAAATACAAGCAGGAAGCTACAGAGCTAAAGTATATTATTAGTGGTGAATTCCCTGCTGGTTGGGAGAAAGCGC TTCCGACATACACTCCAGAGAGCCCTGCTGATGCTACAAGAAATCTGTCTCAGCAAAATCTAAATTCCCTTGTTAAGGTTCTTCCTGGTCTGATTGGTGG CAGTGCAGATCTTGCCTCTTCCAACATGACCTTGTTGAAATCATTTGGTGATTTCCAAAAGGGTACTCCAGAAGAGCGCAATGTCAGGTTTGGTGTAAGA GAACACGGAATGGGAGCAATTTGCAACGGTATCGCTCTTCACAGCCCGGGATTCATTCCATACTGTGCAACTTTCTTTGTTTTCACTGACTACATGAGAG GTGCCATAAGACTTTCTGCCCTGTCTCAGGCTGGGGTTATTTATGTTATGACCCATGATTCAATAGGACTCGGAGAGGATGGGCCAACCCACCAGCCGAT AGAGCACCTGGCAAGCTTCCGGGCAATGCCAAATATTTTGATGTTGCGTCCCGCTGATGGTAATGAAACTGCTGGAGCATACAAAGTTGCTGTGCTTAAC AGGAAGAGACCCTCCATCCTTGCTCTCTCCCGGCAAAAGTTGCCCAACCTTCCCGGATCATCTATTGAAGGAGTTGAAAAAGGTGGATACATCATTTCAG ACAACTCAACAGGCAACAAGCCTGATGTCATTCTGATCGGAACCGGTTCTGAATTGGAAATTGCAGCCAAAGCTGCCGATGATCTACGGAAGGAAGGGAA GGCTGTTAGAGTTGTTTCCTTTGTTTCATGGGAACTTTTTGACGAGCAATCAGAATCCTACAAGGAGAGCGTTCTTCCTGCTGCTGTTTCAGCTAGAGTT AGCATTGAGGCCGGGACAACATTTGGGTGGGAGAAAATTGTTGGAAGCAAGGGAAGAGCAATAGGCATCGATCATTTTGGAGCTAGTGCTCCAGCCGGAA AAATATACAAAGAGTTCGGTATCACCAAGGAAGCTGTTATAGCTGCAGCAAAAGAGCTTATCTAGATGTGTTGGTTTATGGTCATTTAGAACTTCTGATA TTTCTTTTTCCTGGTTTTGGTTTGATATTACACTAGAGTTGGAAAGTGCATGTTATCTGTTTCAAAAGCATTCCTTTGCTTGAATAAGAGAAGAAGTGTT AAAAGTAATGAATTTTTCTGAACTTGTAATAACTTTCACAGTTGAGTTGTATATTTCCACATGGTTAATTTGGTGTTCATGATCATCCATTTGTTCCATC CTTAGGTATGAAAGTGTATTTCTTTGACAGTAAGAAAAATTAGAAGGAAACAACTAAGCAAAC
• Tissue: pods
• Gene name: LI_gene_179118;
• Additional information: details;

Expression of Ll_transcript_450301

FPKM

• PAB: 13.4
• PNAB: 32.7
• PS1: 5.9
• PS2: 20.6
• PS3: 7.7
• PW1: 22.6
• PW2: 26
• PW3: 29.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_450301

• Blastp: Transketolase, chloroplastic from Craterostigma with 87.47% of identity
• Blastx: Transketolase, chloroplastic from Craterostigma with 87.47% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463437.1)
• Pfam: Transketolase, thiamine diphosphate binding domain (PF00456.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;