| Id Trinity | TRINITY_DN50692_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_450955 |
| Sequence | CCTACTTCATATTTCATTTAAATATTTAAGATAAAATATTAACCAATATTATATATTTATATATCTTTTTACATACAACATGTCTCACATTTTTTATTTC AGAAAATATTCTTTTCGGTTTTCCACATGTATCATTACAATCAGACAATCATGAGTCGCCAATATCTATAATTGTACTAGGGCTAACTCTCTCAAAGGTA TTTTTCCATTCACAAGAAACCGAGACATTGCTTAAAAGATAATATGTAATTCTAGTTTGTGCAGAGTTAGAGTGAGACAGAGAAAGCTGTTTCATATTCA ATTTTGTTGGAATATGTAGATCTGGGTTTGTCTTTCTATTTCTATTTCTTTTCCCTTTGCTTTCTATTTCTATTTCTTCTTACTTTTTTGCTTATTTTCT GATACTATCTGCTCTACCTCACCTTCAAGTTTGTGTTTTTAAGCTTTTACTTCTACTTTTTTTATTGCCCCAACTTCTAAAGTTTTGTGCTTGGTCTTAG TCAATCCACATTTCTCACACACCATCTCAAAGGGTGTCAAATTTTGTGGAGCTACAACCCTAATTGCTGATTTTACTTTTTATTTATTATAGTATCAATT CTTTGCTTTATCATATACTTTCCATTGTTTCATCATGCTTAGTTTTCAATTTTCAGAATTTATATGATATCTAAGGGAACTTGTAAAAAATAGTCAACTT TAGTCATGTTTCCCAATTTGCTGGTGGTGTTGTATTGAATGAATGAATTCTCTGCTAAGCAACCATACTGCAGTGTTTTAAATTGCAATTGCGGTCGCAA TTGCAGTAACGGTTATGGATATTGTGATTGCGGTCATTGTGGTAGTTGCGATGCTGAGTGCATCTGTTGCAGTGTGAATTATTTTGTAATTAAAAAACTA TTTTTGAATTTGATGCGGACTGCGGCCGTCACAATTGTGATTCAGAATCACACCACAATTGCGGTCGCAATTTAAATCACTACTGATATTAAATTTCAAG TTCTCAACGCAGGAATTATAATTTATGGTGCCTTGTTGAGTATAATGACAAATACACTTTATTCGGACCTACTTAACCCATGGTTAAGTGAGCTAGTCCA TGGCAACCGAACCCTACTATTTTGGTGGATCAAGCCGGGTTGGCTAGCAGTCCATAATTCACTTTTGATAAATGACAAATGTATCATCCGAAGGGCTTTC CTAGTCAAAGTCTAATTAGAAGCAATTCATTAGTTCATGATCACCATATAGATTGTGGTGGCAGCACAATGGATCCTGCCAATGGAGGAAATAATCTCAC CAGCGATCCTAATCTCTCTTCAAAGCAACGTTTACGTTGGACACATGAGCTTCATGAACGCTTTGTGGGTGCTGTGGCACAACTTGGTGGACCAGATCGT GCCACACCCAAAGGGGTCCTCAGAGTTATGGGTGTTCAAGGCTTAACAATTTACCATGTCAAAAGCCATTTACAGAAATATCGTCTGGCAAAATACCTAC CTGACTTCTCATCCGATGAAGGAAAAAATGCTGACAAGAAAGAAACTGGGGATATGCTTTCCAACCTTGATGGTCCATCTGGGATGCAGATTACTGAAGC ACTAAAGCTTCAAATGGAGGTGCAGAAGCGACTACATGAACAATTGGAGGTATCTTTTGTTGAACTGATCTAATGGCTTATATTAGCAGATTGTATTATG TACGATTCCTATGATGTTTAATCGTGCAAGAGACGATGAAGTGATGAGATTAATCTTTTGATTAGGGGCCGCTTGTTTAGGCTTAAAAAAAGTGATGTTG GCATTAATGTTTTTATGAAAACTCCAGGTTCTCCTAAAGGTTGAGTTTAAACTTTTCCCCGAATAAACGTTTTTAGTAAAAGCCCAACCAAACAAGCACA TAATTTCATAACTGTTTTTTTAATGCCAATCACAGGACATAGTACATTACATGTATGTACTTCTAATCCAGGGAGAAGAGGATAAAGTTGTTAAATACCT TATGCAATTCTAATCTAGGGAGAAGAGGATAAAGTTACATGAATGCATCTGCAGGGTATTAGGTTCTGATGTTAGTAAGTTATGCAGTGGAAAAGGCTAC TGTTTTAACACGGTGCTGCATCGGTAATTCTGACAGCAAAAGATGATAAGCACACTGTTCTTCATCACATGTTAATGATAATCATAGACAATTTTTATAC AACAAGCAAGCCTTAGTTCCACTAGGTTGGGCCGGCTACATGGATCAGACAATGTCACAATGTTCTATCATTAATCATGTCCATTGACAAAGCCATATAG ACAAATTCTATCTTGTTTATAAATCCAAATTGAACATGCTTTCTCCTTCGAATTTTCAGTTTTGAATCAAGAAAAGGCACAATATACAGAATGGTGAATT ATAAACAAGATCCCCAGCTTGTATTTTTTTTTTATGTGAAACAGGTGCAGAGACAGCTACAATTACGAATCGAAGCTCAGGGTAAATACTTGAAAAAGAT AATTGAAGAGCAACAGCGTCTCAGTGGGGTTCTTTCAGCAGATGAACCTGGCTCTGGGGTTGCACCCTCAGCTCAAGGAGGTCTGTGCCACAAACATGAT AACAAGACTGACCCGGCAACTCCTGACCCAGAAAAGGCTGCCAAAGATCGCGCCCCGGCGAAGAGTCTGTCAAATGAGTCTTTTTCATCTCACGATGAAC CACTCACACCGGATTCTGACTGCCACATTGGTTCCTCAGCTGAGAGCCCTAAAGGGGAGAGATCAACCAAGAAGCAAAGAGTAAGCATGGGGGAAGCAGC ATATTCTAAATCAGACATGGTGCTTCCACATCAGATACTGGAGTCAAGCATGTCATCATACCAGCAGCCAAACACTGTTCCTTTGCCAAGAGCAATTTGA CTCTTCATTGAGGGGTATATCTGGCAGAAATGGTGAGGAGTTGGAGAAGTAATTTGTGATTTGGTGTGATATGTAGATTGTGCACTAGGACTTATTTTAG TTTTTCTGTGTTAAGTTTATTCTTTTAGTTCATTATTTGACTGAGTTGGTTTGAATTGGGATAGATAGCTTCTTGTCACCACTTTAATTTCATATCACGG TGCCTATGACTGAGAGGCTAACATGATATCTTTGATTAGACAAAATTGTACCTATGGTTAGGAACAGATGAGTGCTATACAGAAAATTTACTGTAAAAGT CCAAGTTTGTAATATCTAGATGTGTGCATGGGAAAAATGCCTAGTCACTTGCTTCAATAACAGTGTAATTTCAAGCAAGGTTAAAGTGCAAGTGAAATCA AG BLAST |
| Tissue | pods |
| Gene name | LI_gene_179133; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_450955
| Blastp | Myb family transcription factor PHL7 from Arabidopsis with 53.55% of identity |
|---|---|
| Blastx | Myb family transcription factor PHL7 from Arabidopsis with 84.38% of identity |
| Eggnog | Myb-like DNA-binding domain(ENOG4111GBR) |
| Kegg | Link to kegg annotations (AT2G01060) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440063.1) |
| Pfam | MYB-CC type transfactor, LHEQLE motif (PF14379.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |