| Id Trinity | TRINITY_DN50694_c2_g3_i6 |
|---|---|
| Name Transcript | Ll_transcript_450816 |
| Sequence | ATTTCTGCGCACACAAGAGGGTTTTAGTACGGGGTTTCGAAACCAGAGTACTACACTGTTCTTCATTTTTCTTTTCGTGGTGAACAAGATTCTGAAAATT CGTCATGACCCATTTCATGAAGTTCTCTCTTTCGATCTGTGGCAATTGCTGTTGCTGGTTCAACACTCTTGTGCTGCAACACCAATTCTAATATAAGAGC ATCGGTGGCAGCGCGGTTCCCTTTGCCATTACAAGATTACCTGCCATCAACATGGCTGATGCAAAATGATTTGTTTCCTCAACATTTGTCTTTTCCTAGC ATATCTGGTTTGTCCTAAGCACCTACTCTCTATTCTGTTTTGATTTCGGTATATATACACATGTGTTCATGTTTTTGTTACATTGAGAGCTGAACAAATG TAGGACTATTTCCGGTCAATTCTTATAGAGTCAGTCCCGTCCCTTCATCCGACATAACTAAGGAATATTCTGGGGCTGTTCATGATGGGTCAAAGCCATG TGGTTGTTTCGGCAGAGATTCTATTGCAAATGCGGCTGCTAAAGTTGGCCCTGCCGTTGTTAACATCGTAGTTCCACAAGATTTTCATGGTATTACTGCC GGAAAGGGTATTGGCTCAGGAACAATAATCAACAAGGATGGTACAATCTTGACATGTGCTCATGTCGTTGTTGATTTTCAAGGGACGAGAATTTCATCGA GAAGGAAGGTTGAAGTCACTTTGCAAGACGGGAGGACATTTGTCGGTAAAGTGATACATGCTGACCAGCATTCAGATATTGCTATTGTCAAGATCAATTC AGAAACCCCACTTCCAGAAGCAAAACTTGGTTCTTCAAGTAGGCTCCGTCCCGGAGATTGGGTAATAGCCATGGGCTGTCCACTTTCCCTTCAGAATACT GTCACTGCTGGTATTGTAAGGTGTAAAGAAGAAAAAAATCCGTCATATTACAGCCGTCATTTACTAGAGAGTATCTACAAACAGATTGTGCAATTAATCT GGGAAATTCTGGAGGGCCTCTGGTCAACATTGATGGGGAGGTTGTTGGTGTGAACATAATGAAAGTGCTCGCAGCTGATGGGTTGGGGTTTTCTGTACCA ATTGACTCTGTGTGTAAAATTATAGAGCACTTCAACAAAAGTGGGAGAGTAATACGACCATGGCTTGGGCTAAAGATGCTTGATCTTAATGAGATGATTA TTGCACAGCTTAAAAAGAGAGATGCTTCATTCCCTAATGTCGAAAAGGGCATTCTTGTGCCGATGGTAACTCCGAGGTCCCCCGGTGACCGTGCTGGGTT CCGTCCTGGCGATGTTGTCGTGGAGTTTGATGGGAAGCCTGTCGAAAGCATGAAAGAGGTAATCGAAATAATGGGGGATAAAGTTGGAGTGCCCATGAAG ATACTAGTTAAAAGAGCAAATGATAAATTGGTGACTTTGACTGTTATTCCAGAAGAATCCAATCTTGACATATGATACTGTGGTTTTATTAAGGAGAATA AAATATCTCCTTATATAAAGATATAAGTTATCTTCTTCTGCCATTGAAATCATGACATGTGCATTGTTTTGTCATTTTCTATAAAAAAAATTAAAATTAA ACAAAATAATATACGTGTCATATTTTTACCAGCCGAATGAGATAAGTTTCTCCTGATATGAGGAAACATATTATTTTCTTTATTCAGAACCAATGCAATC TCTTTTTAGTGCTACACACTCATAGTTGGTGCCATTTATCTCTTTCCATGTCTGTGCGTAAATGATCAAACTGTACTATCCTTTCTAGAAATGTCTTCTT TTTTCCCATTAAAAAATTATCTCTTCCCâBLAST |
| Tissue | pods |
| Gene name | LI_gene_179162; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_450816
| Blastp | Putative protease Do-like 14 from Arabidopsis with 69.57% of identity |
|---|---|
| Blastx | Putative protease Do-like 14 from Arabidopsis with 72.78% of identity |
| Eggnog | Serine protease(COG0265) |
| Kegg | Link to kegg annotations (AT5G27660) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019418964.1) |
| Pfam | PDZ domain (PF13180.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |