Id Trinity | TRINITY_DN50694_c2_g3_i8 |
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Name Transcript | Ll_transcript_450819 |
Sequence | ATTTCTGCGCACACAAGAGGGTTTTAGTACGGGGTTTCGAAACCAGAGTACTACACTGTTCTTCATTTTTCTTTTCGTGGTGAACAAGATTCTGAAAATT CGTCATGACCCATTTCATGAGAAATTTTCGACATTTTAACAGAAGTTCTCTCTTTCGATCTGTGGCAATTGCTGTTGCTGGTTCAACACTCTTGTGCTGC AACACCAATTCTAATATAAGAGCATCGGTGGCAGCGCGGTTCCCTTTGCCATTACAAGATTACCTGCCATCAACATGGCTGATGCAAAATGATTTGTTTC CTCAACATTTGTCTTTTCCTAGCATATCTGGACTATTTCCGGTCAATTCTTATAGAGTCAGTCCCGTCCCTTCATCCGACATAACTAAGGAATATTCTGG GGCTGTTCATGATGGGTCAAAGCCATGTGGTTGTTTCGGCAGAGATTCTATTGCAAATGCGGCTGCTAAAGTTGGCCCTGCCGTTGTTAACATCGTAGTT CCACAAGATTTTCATGGTATTACTGCCGGAAAGGGTATTGGCTCAGGAACAATAATCAACAAGGATGGTACAATCTTGACATGTGCTCATGTCGTTGTTG ATTTTCAAGGGACGAGAATTTCATCGAGAAGGAAGGTTGAAGTCACTTTGCAAGACGGGAGGACATTTGTCGGTAAAGTGATACATGCTGACCAGCATTC AGATATTGCTATTGTCAAGATCAATTCAGAAACCCCACTTCCAGAAGCAAAACTTGGTTCTTCAAGTAGGCTCCGTCCCGGAGATTGGGTAATAGCCATG GGCTGTCCACTTTCCCTTCAGAATACTGTCACTGCTGGTATTGTAAGGTGTAAAGAAGAAAAAAATCCGTCATATTACAGCCGTCATTTACTGTATGATA ATCTGAGTCTAAAGCTATATTGCTGATTACTGAAATCCAATGATTTTTGTATAGTTGCGTTGACCGGAAAAGTAGTGATTTGGGTTTTACTGGCATGCAG AGAGAGTATCTACAAACAGATTGTGCAATTAATCTGGGAAATTCTGGAGGGCCTCTGGTCAACATTGATGGGGAGGTTGTTGGTGTGAACATAATGAAAG TGCTCGCAGCTGATGGGTTGGGGTTTTCTGTACCAATTGACTCTGTGTGTAAAATTATAGAGCACTTCAACAAAAGTGGGAGAGTAATACGACCATGGCT TGGGCTAAAGATGCTTGATCTTAATGAGATGATTATTGCACAGCTTAAAAAGAGAGATGCTTCATTCCCTAATGTCGAAAAGGGCATTCTTGTGCCGATG GTATGTTCCTAATTTTCCTTTCTATTTACCTTTCAGCAAACTGTTCTTAAAACTCTAGTTTGTGTAATTCTTTGAAGTCTAGATTCAATTGACAAATCTT CGCACTTGTTTTATTCATCATGAAAAATTGGTTGTAGAAGTGATAGCAAAACTGGTAAGTAGCAACAGTGAATGGATTTAGTTACAGTTTACTTTGCTCT CTCGGGGCAATGCTTTGGCCGGTAACAGTATTCCGCTGTTAGGATTTCTGCTTTCCGAAGGACCACTGTAGTAGTAACTAGTAGCGAGGCACAAGTCAGT TCACAGTCACATGCTTGTTATATGTAAACCGGGCGCATTCCTGAGCATTATCTTGGTGAATTTTGGGGGCCCGGAGGAATTCGGGATGAATGTATACTTG AGAAAAAGGTTAGGTGTAACTTGTTCATATTTTACTCATAGAATTGAGAAGCTTGATAAGGGTGTAGAAAAATCGAAATTAGGGAACAAATAATTATTTT TTTTGGGCATTGGATCAATACTTGGTGCGGGTAGTCGGGTAGATGAACAATATGCGCTATTCATGATCTAGTACCAGATTTAGGACTAATTTTTAAGCTC GCGAAAATCTATATTACAAAGAACAGCTTTGGGCATTGCATCGTCAGGGCGCTCGTAGTGTCTTTTCTTGATCGTGTCGTTATCTCAAATATTATATACT CGACTAGTGTAATGTTTTTTCGACGAAATTGAATTGACTATATTTAAGTCATTGAGTGAGTCAGCGGTATAGACTTGCTTATCTTCATTTGTTATCATTC ATGCAAAATCTAATGACAGGTGCTGTTATGAATAGGTAACTCCGAGGTCCCCCGGTGACCGTGCTGGGTTCCGTCCTGGCGATGTTGTCGTGGAGTTTGA TGGGAAGCCTGTCGAAAGCATGAAAGAGGTAATCGAAATAATGGGGGATAAAGTTGGAGTGCCCATGAAGATACTAGTTAAAAGAGCAAATGATAAATTG GTGACTTTGACTGTTATTCCAGAAGAATCCAATCTTGACATATGATACTGTGGTTTTATTAAGGAGAATAAAATATCTCCTTATATAAAGATATAAGTTA TCTTCTTCTGCCATTGAAATCATGACATGTGCATTGTTTTGTCATTTTCTATAAAAAAAATTAAAATTAAACAAAATAATATACGTGTCATATTTTTACC AGCCGAATGAGATAAGTTTCTCCTGATATGAGGAAACATATTATTTTCTTTATTCAGAACCAATGCAATCTCTTTTTAGTGCTACACACTCATAGTTGGT GCCATTTATCTCTTTCCATGTCTGTGCGTAAATGATCAAACTGTACTATCCTTTCTAGAAATGTCTTCTTTTTTCCCATTAAAAAATTATCTCTTCCC BLAST |
Tissue | pods |
Gene name | LI_gene_179162; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_450819
Blastp | Putative protease Do-like 14 from Arabidopsis with 55% of identity |
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Blastx | Putative protease Do-like 14 from Arabidopsis with 54.62% of identity |
Eggnog | Serine protease(COG0265) |
Kegg | Link to kegg annotations (AT5G27660) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019418964.1) |
Pfam | Trypsin-like peptidase domain (PF13365.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |