| Id Trinity | TRINITY_DN50695_c1_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_450001 |
| Sequence | CCCATTTCCATAACTATTTTTCGGTAAACACATAAATGATTACTTAATAAACCCTTCACCCTCCATCGCACTCCTAGTTTGAATTTGTAATAATAGTTAG TTTTTGCATCTGGTTCCCGCCTTTGTTGAGTTGAAGAGTGAGACCGAGAAATGTGTGGAAGAGCGCGTTGTAGTCTTAGAGCCGATGATATCCCAAGGGC CTGTCACCGCACCCTTCCACACCCTCCTTCTCTTCACATGGACCGGTACAGGCCATCCTATAATGTATCACCGGGTTTCGACATGCCAGTAATTCGTAGA GAAGATTCATCTAATAGTGAAGGTTGTGTTCTTCATTGCATGAAATGGGGTTTGATTCCCAGTTTTACCAAGAAAACAGAGAAACCTGATCACTACAAGA TGTTTAATGCTCGATCTGAATCCATAGATGAAAAGGCTTCATTTCGTCGTCTGATTCCTAAAAACAGGTGCCTTGTAGCAGTAGAAGGATTCTATGAGTG GAAAAAAGATGGTTCGAAGAAACAGCCTTACTATATTCACTTCAAAGATGGAAGACCACTTGTATTTGCTGCACTTTATGATTCATGGCAAAACTCTGCA GGTGAAACACTTTGCACGTTTACTATTGTTACAACCTCTTCTTCTTCAGCATTCCAGTGGTTACATGACAGGATGCCTGTTATTTTGGGTGATAAGGATT CAACTGATACATGGCTAGGAAGTTCTGCTTCCGGTTATAAGAATGTTCTGAAGCCATATGAAGCATCCGATTTGGTGTGGTACCCAGTGACACCTTCTAT GGGTAAGCCATCATTTGATGGGCCTGAGTGCATAAAGGAGATTCAATTGAAGGCAGAAGGGAACACTTCAATCTCTAAGTTTTTCTCAAGAAAGGGAGCT GAAAGTGGAGACGTAAGACAAGAGAAGAAGCTATCAAGTTATGAAATCATCGAGACCGAACTGCCAAAAGACCCGAGTGAGGAGGCCAAGGCTGAGAAGG TAGAAAATGACTTAAAATCCAGTGCTTGTCCCCATTCTCAAGATGCTACTAAGGTCCCAGTCAAGCGTGATTACGACATGTTTTCGGCTGATTCAAAACC AGATTGGACTAATAATGATAAGGTGAGATCAAACCCTATTAAGAAAAAGGAAAAAGGGAAGGCTGGTGATGATAAACAAGCTACCTTATTTTCTTACTTT GGAAAAAGGTAGACCAGTTTATGTTTGCATGAGCATGAACATTGCTATGTTTTGTTTTGGTGTAAATTAAGTATTGGCATTTTGTCTTAAGCTAATGTAT GTCCATATAGGTCTAGCCCATGGTTTGTGACTTTGTGTTCATAAGAGTACTTTTAAACTATTACTTTTTAGGTTTTGCTTATCACAAAATGTGGTCCAAG TTTTTACCTGCTACAATGTTCTTTTTAGGATCATATTCCTAGGTAATGCTACAATTATGTTATGTTTATTTGGTTGTAACCAAATTGATTTTTACTTCAA CTTTCATTCAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_179170; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_450001
| Blastp | Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein from Silurana with 34.55% of identity |
|---|---|
| Blastx | Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein from Silurana with 34.55% of identity |
| Eggnog | conserved protein(COG2135) |
| Kegg | Link to kegg annotations (394754) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450068.1) |
| Pfam | SOS response associated peptidase (SRAP) (PF02586.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |