Ll_transcript_377143

• Id Trinity: TRINITY_DN50703_c0_g1_i20
• Name Transcript: Ll_transcript_377143
• Sequence: ATTATCTTCATTACCAAAAACCTAAATTATTCACAGCCTCCATAAACCAAAAACCATATCCATTCTTCTCTCTTCTCTCTTCTCTCTTCTCTTCGAAGCT TTTTGAATCTCTCTCTCGACCATCATGTCTGGGGAAGTTGTTTTTGATGGACAAGATGCAGGTTATGTGCCCGAGAACATTGATTATCCGCAAAACCATT CCGATGAACATGATGAAGGAAATGTGATTGATGATGAATCTGGGTTTCCTCAACTGCAGCCTGATGAACATGATGCCGAAATTTTAGCCGAGGAGGAAGC CGATCCCCTCGAAAATGAATTTGATGGTCATGGTGTTGAAGAACTGCCTGGAAACACTGATTCCCTTCCACAAGAGCATACTGTAACCGAGGAGGAACAT CATGATGGAGGAGATGTGACTGAGAATTTTACTTCTCAAGAAGTACAAGGACCCGAGGGTGATTCAAAACCAAGTGAAATAAAAAAATGGCCAGGTTGGC CTGGAGAGAATGTTTTTAGAATGCTGGTTCCTGTGCAAAAGGTTGGTAGTATTATTGGCCGCAAGGGAGAGTTTATCAAGAAAATCACCGAAGAGACTAA AGCTCGAATTAAGATTCTCGATGGTCCACCAGGAACCACCGAAAGAGCAGTGAGTTTACTGTTCAATTTCTTGTCATTTATAAGTGAGAATATTGTGGAT ATATATACACTGTTTATTGAGGCATATTTTCCATATTTCTGTTCATATACTGATCCCTGTGCTTATTTGGATGCATTATCTGTTTTTAGATTTAAGTTTT GCCGTGTCTTCTCACCCCTTGCAGTTAGGCTTCTATCTTTTTTGTTGAGTTCATTAGTTTATTGATTATACTTGCAATCATGTCTTAGGAGGTGTCTTTG TTCATTCATTTTGAACTTCATAAGAACTTAATATGGTTGGGATGCTGAGAGATCGGTGCTTTCTTTTTTGTCTGAAGATTTCTTATCCTCTCATAATTTT CTCCCTTCTCTAATAATATTCCTGTTATAAAAAAATCAATGACAGAGCCACACTGTAAAAGTTAGCTGTTGTAGTTGTAGAGGCCAAGGCCTTATAAACC CCAAACTAGATTCCCATACTTCTAGTGTGAGTCTCAAGTCCCATAACGTGTAATTCAATCCTAACATCCCACCATGCTCTGCAGCTTTGCCACCCATGTG GTTGCAGACTGGTTATGCACTAGCCCTTTCTTTGACTAGTCCTGAGTGAACAATGTGCAATGCTGGTTTCACCATCTCCCCACTTTTTTTCAGCCAAGAG ACATGATGGAAAGTTTGATAACAATTGATAAGAACCTTGGGAAAACCACATCACAAACATAGCTTTTGTAGTTGGAGAGCCCAAGTCCATATAAACCCCA CACGGGAATCCTATACTTCCAGCATGGGACACAATTCCCGCACCTTGCAATTGGATTCTAACACAAACTACACAACAATGCAAATATAACATCCTTACGG GTTATTTCAATCTATTTGAACTATCACCATCGTTATTAATAAAATTCGATGCTATAAATTTTGGTAACTACTTGGTGCTTAAAAATGGAAAACTTATACT TGATTAAACAAACTTCTTATATAATTAATTTGGAATTGAAACTTACTGATTTATTCATGATAAAATATGTTAACACATGAATACTGTTGCTAAGGAATTA AATGAAGAAAAACAAATTGTCAAGGAAGTGAAACTATAAAAATATCTGTAAATCAAGTAGCAGAATACATAAGTGATAAATAATCAAACAGGTTAAATAT ATAAATAACAGAAATGTCTTTTGTCACGATAACCAAATGGGTGTGTGCAGGTTGTCAGCAAATATGAATGACCAAAGTGACCTCAAACTGAAGAGCTAAA GTTCAAGTTGCAGGGAAACAACAACAAGCTTATACAACTGCTGAAATGTTTTTGTCTTAAGAATCAGGACTAGTTTTGCAGACTTTGGTGGCAAGAAGCC TTCATTGTACCTGGTTATGGTTTCTGCGAAAGAAGAGCCAGATCGCACCATACCACCTGCTGTGGAAGGTTTGTTAAGGGTTCATAAACAAGTTGTCAAT GTCGACCAAGATCCCGCAGACAGTGCATCAGGTGCTGGACGTCCAGTTGTTACAAGGCTTCTAGTGGCAGATACTCAAGCTGGAAGTTTGATTGGGAAGC AGGGGTCCACTATAAAATCCTTCCAGGATGCTTCTGGTTGCAATATACGTGTTCTTGGATCAGTAGAACACTTGCCAGTTTTTGCTCTGCGAGATGACAG TGTTGTGGAAATACAAGGGGAGTCTGCTGGGGTTCACAAGGGAGTTGAACTTATTGCACTTCATCTACGTAAGTTCTTGGTCGACCGCAGTATAGTTGGA GTTTTTGAAGCAAAGATGCAAAGGCCGGATGTTCGAGCTAACCAGAATGTGCCTCCACACCAACCACACCACCAACCTTGGGGTCCTCCTCCTCCTCAAG GGTTTCCGGCTACTGGAGGTGGTGGTGGACCTGCTTTTGCACCCAATCCTCAACTTATGCCACCTCCACATAACTATGATAACTATTACCCACCTGCTGA CCTGCCTCCTATGGATAAGCACCTTCATCAGGGTCCACCACCTGCCTACGCAAGGGATCCTTCTATGGGAATTCATTCATCCACTGCACCACCACAACAA TCTGTTGCGACTAAGGTCACACAGCACATGCAAATTCCTCTATCCTTTGCAGATGCTGTTATTGGAGCATCAGGTTCAAATATCAGCTACATCCGTCGTG CTAGTGGGGCAAGTATTACAATTCAGGAGACCAGAGGTGTGCCAGGGGAGATGACTGTTGAGATAAATGGTACTGCATCACAAATACAGGCGGCCCAACA GCTGGTGCAGAATTTCATGGCTGAAGCTGCAAGTGCTGCATCACAGCAGGAACATATGGGGGGATCAATAAACCAAGGTTACAATGCCTATCCGACGAAT GCTCCTGTTTATCAATCTCCACCTTCAAATGCTAGTGGTCATACAAGCCATGCTCCTTCTGCAGACTATGGTTCTGTATATGGCACCAATTATGGCTATT AACAAGATTACAATCAATTTTCATTGAGGAGCCTTACGTTTTGTAAACATTTAAGTTCAATTCTAGTTCTTGTTGTCGTGTCTTATATCCCTTATATTTA AGCTGTTTTGCATTTGATACAATGACTGGATAGGATTTAGAGGACATAACAAGTTTCAAACCCAAAAAAAAGATATGATAATTTGGTAGTTTTTATGGTT GGTTTTGTTTGTGTTTTCAAGTCCTTTTTAATTTGGTTTTGAAGGGGAAGGTGGTTGAATATATTAAGCATGACGTCTTACGTTTGATCCTAGATCTCTG TATGAAAAAATAGTGTAAAACTTTCCATTTTATGTCTTTAATGGGTGGAGAAATTGAGTAAAAAATATTTTAATTCTTATTTGCG
• Tissue: pods
• Gene name: LI_gene_179254;
• Additional information: details;

Expression of Ll_transcript_377143

FPKM

• PAB: 0.9
• PNAB: 2.3
• PS1: 3.8
• PS2: 3
• PS3: 3.1
• PW1: 3.5
• PW2: 4.6
• PW3: 4.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_377143

• Blastp: Flowering locus K homology domain from Arabidopsis with 54.12% of identity
• Blastx: Flowering locus K homology domain from Arabidopsis with 56.97% of identity
• Eggnog: mRNA transport(ENOG410XNN8)
• Kegg: Link to kegg annotations (AT3G04610)
• CantataDB: Link to cantataDB annotations (CNT0002411)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441915.1)
• Pfam: KH domain (PF00013.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;