Ll_transcript_378287

• Id Trinity: TRINITY_DN50704_c1_g2_i1
• Name Transcript: Ll_transcript_378287
• Sequence: GAACCCTTCAGGAGCAGGAGAGGGCATATATGATGCTTAGAATGAATAATGATGGAAGTGACTATGGAAGTTGGGAAGGTGGAAGCTATTTGCATGAAGG CGACTTTAATGATCTCGATGATGCCATTGACGAGGATGAGGATGATGATAATGATGATAACGAGGATGTGGAGGGATACGAGGATGAAGATGTGTTTTAT GTCCATGCTCATGGTACTGGTGGAGAACACGATAGCCCGAGGGTTGAATTTGACCCTGCTGTATTTACAAGTGACGAAGCGTATGCAAGAGCGTTACAAG AGGCCGAAGAGAGGGAAATGGCTGCTAGACTCTTCGCCCTTGCTGGTATAAGTGATCGTAAGTTTAGTACGCTATCAACGTGAAATCTGTGTATTTTTTT TGTTCAGATTATCCTGCAGTAAGAATTGCTTGTTGCCTTGTTTCATTTTCCATTACAGAAGAGGAACATGGTGCTAATTCTCAGGATGCATGGGAGGATG TTGATCCAGATGAACTTTCATATGAGGAACTACTGGCCTTGGGTGAAGCAGTTGGAACTGAGAGCAGAGGCCTTTCAACTGATACTATCGCCAGTTTGCC TTCGGTTAACTACAAGACCGGTGGTGATCAACATGGAAGCAACGATTCGTGTGTCATTTGCCGTGTGGACTACGAGGATGGTGAGTCCTTGACTGTTCTT ACCTGCAAACATCTGTACCATCCTGAGTGCATTAACAACTGGTTGAAGATAAACAAGGTATGCCCAGTTTGCACTACTGAGGTGTCTACTCCTGGGAGCA GCTTGTAGGAGGAGGATTAATAGCTGTTATTGGCATCAAATTGAAGATAAACAAGGTATGCCCAGTTTGCACTACTGAGGTGTCTACTCCTGGGAGCAGC TTGTAGGAGGAGGATTAATAGCTGTTATTGGCATCAAATTGAAGAAAACTTGTACAAAATTAGGATCTATATCCCTTATTTTAGTGGTAGTATAACATGT TTGGGACACAAGACTTTTTAAGGGAAATTACTACAATGTTTAATTTAAGTTGAAAGAATTATATTAACTAACTTTTAGTATTTTGATTATCTATAATTAT ATAATTTTTTAGAAAAGATTAAAAAATATCAAGAATAAAAATATGAAAGTAAAAATTAAACAATGATAATAATTATATCATATTTTGGGTTTTTATTAGG ATGACAATATGGGCTTGACCCAATGGGTCAGCTCGTTTTGATTGCCATTTTTAACGGGCCGAACCAGGGATTTGAGCCCTTTTAGTCATAAGGTCGGGTC GGGCCAACCCCTAATTTGCCGGGTCGGGCCGGCTAACCCCTAATTTGGCGGTCCGGGTCGGGCTAGCCCCATATTGTCAATACCAACCTTGAGTTTCTAT GTTTATTTAAGAATTTCTATAAAAAAATTACATGTTCATGGTCGGTAGATAAATTATGTA
• Tissue: pods
• Gene name: LI_gene_179260;
• Additional information: details;

Expression of Ll_transcript_378287

FPKM

• PAB: 48.7
• PNAB: 0.9
• PS1: 2
• PS2: 1.7
• PS3: 3.6
• PW1: 0.7
• PW2: 1.5
• PW3: 1.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_378287

• Blastp: E3 ubiquitin ligase BIG BROTHER-related from Arabidopsis with 51.61% of identity
• Blastx: E3 ubiquitin ligase BIG BROTHER-related from Arabidopsis with 72.57% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT3G19910)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452606.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;