Ll_transcript_378305

• Id Trinity: TRINITY_DN50704_c2_g1_i1
• Name Transcript: Ll_transcript_378305
• Sequence: TGTTCTTCTTCCGACACACTTTTAGGGTTTGCACTGATTATTATTCCACTCTAATTTCAGCGCCGCCCTTCATTTTCATTCTCCGATCCCTATCCTCAAC TACCTTAGGTTAAATTATCGTCTAAGTGTCTCGTTGCCTTTGTGTTGTTGATGATTAAATGTTACTAGTGTAGAAATGTCCAACAATCTTGTTTCCGAGC CGATACGTGGCATGCAGATGGCTCAGTTGGAGTCAATGGTGAACAGCGTTGATTCGTCGGGGAAACAGATGGAAATGGGACTCTTAGGATCCGGTGTTTC CCTGTCGCAGCCACAGGCTACCTCGAATGATCATGTTGGAATGTCTGGGTCTCAAGGCTTACCAGCTTCACTCATGCAGAGTGGACACGGGGTTGGAGCA CATCTGAGTAGCGTGGGAATGGCTCACCTTCTTTTGCCTCAGAAACAATCCTTGCAAATGGGGACAATGCCGAGTAATATGGGGCCACAGCAACTGTTGA CCACTCCCAAGCGGAAATCGCCGATGGAGTTTCAATCTGGTAGCTCTGTGAGCAAGCGGGTTGCACATGTGGGCAATAGACCTTGGTTGCAGGAAGTATC TAATACATCCAACAAAGGTTCTACGCAGATGCAGTCCAAGTCTAATGCCTCCAAGTCGCAGCATTTGGCAGCGTCTGGTAAGAGAAAAACGCAGATGGAA TCCACATCCGGTAAAACTGGTACACCTCGGTCCACCAATACTAAAAATCAAAATGCAGAGATTAAACAAACTTCCAAGGTTCAAACAGAATCGTCTGAAA CTGTCAGGTCCAAGATGAGGGAATCATTAGCTGCTGCTCTAGCCTTGGTTTCTCAGCAAGACAAACCTGTGGCTACAAACAATAATACACTAACTGGTGC CTCTATCACTGAAGATAAGTTAAAGGATAGCTCCCCAGGTACAGGGCCAGCATCTTCTTCCATCGATGCTGCTTTAGAGCAAAAGCAGGAAAGTTCTCAA TCTGTTCATTCCTCTTTCACTGCAGCTGATTCAGTTGACCATGTAATGGGAGAGCAAGGAAAAGGTACGACCTCTAATGAAGATTTATCTGAAAAGCGCA ATGACTATGAAGCAGGTTCCACAAATGTATTTAATAATGAAAGTATACTAAGTTCTATGCAAGTCTTGAATTGTGATAAGCCAGACTTCCAATCAAGTTA CACTTTGACTACTGATGATGTTCCTTTCAGTGACAGTTTCTTTGTGAAAGATGACCTTTTGCAAGGAAATGGTCTTTCTTGGGTAATATCTGATATGATG GACATGGAAGACCCGAGGGATTGCCAAACTACTATAGAGCAGAAACCAGGACCTGAGGAAATAGGCAGAGGTTGTAGTGAGACAGTCCTTTTACCTGAAC CTTTAGCCTCAAGGATTGAAGAAGAACTCTTCAAATTGTTTGGAGGCGTGAATAAGAAGTACAAAGAGAAAGGGAGGTCTCTTTTATTCAATTTGAAAGA CCGCAATAATCCTGAACTAAGAGAAAGGGTTATGTCTGGTGAAATTCCCCCAGAACAGTTATGTTCGATGTCCGCAGAGGAACTTGCTTCGAAGGAGCTT TCTCAGTGGAGGATAGCCAAAGCGGAGGAGCATGAGAAGATGGTGGTTTTACCTGATTCCGATGTTGATATTAGACGCTTGGTCAAGAAAACACATAAAG GTGAATTTCAAGTGGAAGTTGATCATGAAGACAATGTCCCAGTGCAGGAGGTTTCTGGTGGAACAACCTTAGTTGCTCGAAACCAAAGAACTAAAAAGGA TGTGGAAGTATCTTATCCTAAGCCTGATGTAGTCAAAGGTGATATGAGCACTGATGGTCAGAAGAGCAATTTACAGATGGATAACGTTGGTTCCGATCCA ATGCAAGGGCTTATGACAGATGATGCATTGAAGGACCCTGATTTTCTTCCGCCAATTGTATCTCTCGATGAATTCATTGGATCCATTAATTCTGAGTCAC CGTTTGTGAGTTTACGTGGGGAGCCTGCAAAAGCAAAACCTATCTCAGACAAGGATGATTCCATGGTTGGAGCTAGATTGAAAGTTTCGGATTTAACTCC AAGTGAGCAAGTTGATGTCACCCCTGATATGCTTGAGAGGGAGAAGCTTCAGAGCACATGCGTCAATCCAGATGCTTCAGAGGGAACAAGGAATAATGCA GAATCTGGGGGCATTTCTTCCGATATAAAACATGCTGAGAGTCATGTTGACGTGAAGCCGACTGATGGTCATATCAAGGAAAGAGCAATTGATGAAATCA AGTCTTCTTCCGGTGTTGCTGAGTTGAGAGTCAGTCAGTCTCCCGCAAAGGATGAATGTTTCTGGGAGGGAATGCTTCAAGTCAATTCCAATTATTCAGT CATAAGCATCTTTAAAAGTGGTGAAAAAACTTCTGCGAAAGAGTGGCCTGGGCTTCTTGAGATCAAAGGAAGGGTTCGACTTGATGCATTTGAGAAGTTT CTACAAGAGCTTCGGCTGTCAAGAAGTCGAGCTATCATGGTATATCAAGTTCTTTTTGTTGTGCTAGACTTGAAAATTGTCTTTTTATGTCACTGCCCAT GTAGAAAGGAATATAACAAAAAAAAAGTATCTTGGGTTATGCCATTTTTTGTGCTTTTCATTTGTTGATGAGATAAAGGAGCTGGTGTGGTGTTCGGTGA TTGTGTATGACAAATGACCCATACCTTTTAAGGCTTGCAGGATAGGGTATTTTTCTATTATATAAAGAGTATAAAAGAACGGTTTAAGAGAGAGCATGGG GTGTTTTTGTAGTAACAATTTATGAAATACAGAAACTTCAGTGTCACATAGGACGAAACTGAATATTTGGGATTGTGTAGCTTGTAAAAAAAAAGCCCGT TAAAAGTAGGATATTTTGTGTAATTAAGTTTAAGATCAGTATAATTTCCTCTAATATATGATATAATTGTGATGCCATCGTAAAGAATATTTTTACATCA TTGTATAACAGGATATATTCTCACATAAATTTTTAAAGAGATGTATTGTCACATCACGAATGTAAATGATGTATGAATAGTCAATAATGCAAAATCTTAT ATTGATAGGCATAGAATTAAACTCATGGATACATTTAAATGTTTTCTGGAACTTGAGGAATTAGCTTATATAAAAAATTGTGAGAAAAATCCTCCCTTAA AATTCCTTTCCCATTTTGGGGTGATACCCAACTGAATTGTCCATGCATTTCATTACGTTTTCACATTTGTATATAGCTTGTGAAACTCTCATGTTAGCTT CTTTTTGGTCCATGTGTAATTAAAACGTTTCCCTGTATTTGCAGATTTTGCATTTTGTTTCCAAAG
• Tissue: pods
• Gene name: LI_gene_179264;
• Additional information: details;

Expression of Ll_transcript_378305

FPKM

• PAB: 0.9
• PNAB: 3.7
• PS1: 5.2
• PS2: 4.4
• PS3: 3.6
• PW1: 4.3
• PW2: 5
• PW3: 8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_378305

• Blastp: PHD finger protein 3 from Homo with 41.41% of identity
• Blastx: PHD finger protein 3 from Homo with 41.41% of identity
• Eggnog: PHD finger protein 3(ENOG4111K1A)
• Kegg: Link to kegg annotations (23469)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414908.1)
• Pfam: Transcription factor S-II (TFIIS), central domain (PF07500.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;