Ll_transcript_378317

• Id Trinity: TRINITY_DN50704_c2_g1_i8
• Name Transcript: Ll_transcript_378317
• Sequence: GTGCGTTTTAAGGATAAAACTTGAGAAGAATGAGAAGAACGTGATATTTCATTGCGCTATCGTCTTCTTCTTCCTCTGAAATAGAATTAGGGTTTGCACT GTTCCTTTCAGCGCCGCCCATACCTCACACTAATTCCATTCTCAGATCCATTACAACAACATCAACCATAGGGTCTATTACCTTATGAACGAATGTCATT GGTTCAAATCATCGGAACAACCTCTTCACCCGTGGTGGTAAAGGCTGCATACATCTACTCTCACCGGACTCACTAGGTTACTTTATCAACTCAGTCTCTC CTTGCTGTTGTTTTATTTATGGTTAAATATTAACCGTGTTAGATGTCCAACAATCTGGTTTCTGAGCCGATACAAAGCTTGCGGATGGCTCAGTTGGATC CTGTTGTGAACAATGTTGATCCATCAGGTCGACAAATGGAAATGGGACTTTTAGATTCTGTGTCCACTGTTCCCATGTCACAGCAACAGGCAACCTCAAA TTTTCATGTTCGAATGTCCGGGTCTCAAGGCTTACCAACTTCAGTCCCGCAGACTGGACACAGGGTAGAAGCACATTTGAGTAGCCTGGCAATGACTCAC CTTTTTTTGCCTCAGAAACAATCCGTGGAAATGGGGACAATGCCGAATAATATGGGGCCACAGCAAATGTCAACCACTCCCAAGAGGAAGGTGCCAATGG AATTTTCGTCTGGTAGCTCTGTGACATCTAACAAGCGGGTTGCGCATTTGAACAGACCTGTGTTGCAGCAAGTATCTAATACATCAAATAAAGGTTCTCA TCAGATGCAATCCCAGTCTAATGCCTCCAGGTCACAGCATGCATCAGCATCTGGTAAGAGAAAAACTCAGATGGAATCCGGTAAACCCGGCACACCTCGT GCCGTGAATCCTAAAAGTCAAAATGCGCAGATTAAGCAAACTTCCAAGGCTCAATCTGAATCATCTGAAAGTGTCAGATCCAAGATGAGGGAGTCATTAG CTGCTGCTCTAGCCTTGGTTTCTCAGCAAGACAAACCTCTGGCTGTGAATAATAATACACAACACGATGCCTCTAATGTTGAGGGTATATTAAAGAACAA CTCTCTGGGAACTGGGTCAGCATCTGCTTCCATCAATACTGCTTTGGAGCAAAAACAGGAAATTTCTCAATCTGCCCACTCCTCTTTCACTGCAGCTGAT TCAGTTGAGCACATGATGAGAGAGCAAGGAAAGGGTACAACCTCTTATGAAGCAGGATCCACAAATGTATATAATGAGGAAAGTATACAAAGTTCTATGA AAGTCTTGAATTGTGATAACTCAGACTTCCAGTCAAGTTATACTTTGACTACTGATGATGTTCCTTTCAGTGACAGTTTCTTTGTGAAAGATGACCTTTT GCAGGGGAATGATCTTTCCTGGGTTATATCTGATATGATGGACATGGAAGACCCAAGGGATTGCCAAATTACTATAGAGCAGAGACCACCTGAGGAAATA GTCAGAGATTGTAGGGAGACAGCCCTTTCACCTGTACTCTTAGCTTCAAGGATAGAAGCAGAACTCTTCAAATTGTTTGGAGGCGTGAATAAGAAGTACA AAGAGAAAGGGAGGTCACTTCTATTCAATTTGAAAGACCGCAATAATCCTGAACTAAGAGAAAGGGTTATGTCCGGTGAAATTCCCCCAGAACAATTATG TTCCATGACTGCGGAGGAACTTGCTTCAAAGGAGCTTTCTCAGTGGCGCATAGCCAAGGCTGAGGAGCATGAGAAAATGGTGGTCTTACATGACTCAGAT GTTGATATTAGACGCTTAGTCAAGAAAACACATAAAGGTGAATTTCAAGTGGAAGTTGATCATGAAGACAATGTCCCAGTGCAGGAGGTTTCTGGTGGAA CAACCTTAGTTGCTCGAAACCAAAGAACTAAAAAGGATGTGGAAGTATCTTATCCTAAGCCTGATGTAGTCAAAGGTGATATGAGCACTGATGGTCAGAA GAGCAATTTACAGATGGATAACGTTGGTTCCGATCCAATGCAAGGGCTTATGACAGATGATGCATTGAAGGACCCTGATTTTCTTCCGCCAATTGTATCT CTCGATGAATTCATTGGATCCATTAATTCTGAGTCACCGTTTGTGAGTTTACGTGGGGAGCCTGCAAAAGCAAAACCTATCTCAGACAAGGATGATTCCA TGGTTGGAGCTAGATTGAAAGTTTCGGATTTAACTCCAAGTGAGCAAGTTGATGTCACCCCTGATATGCTTGAGAGGGAGAAGCTTCAGAGCACATGCGT CAATCCAGATGCTTCAGAGGGAACAAGGAATAATGCAGAATCTGGGGGCATTTCTTCCGATATAAAACATGCTGAGAGTCATGTTGACGTGAAGCCGACT GATGGTCATATCAAGGAAAGAGCAATTGATGAAATCAAGTCTTCTTCCGGTGTTGCTGAGTTGAGAGTCAGTCAGTCTCCCGCAAAGGATGAATGTTTCT GGGAGGGAATGCTTCAAGTCAATTCCAATTATTCAGTCATAAGCATCTTTAAAAGTGGTGAAAAAACTTCTGCGAAAGAGTGGCCTGGGCTTCTTGAGAT CAAAGGAAGGGTTCGACTTGATGCATTTGAGAAGTTTCTACAAGAGCTTCGGCTGTCAAGAAGTCGAGCTATCATGATTTTGCATTTTGTTTCCAAAGGT TCAACTCTTCTTGAGGTTGCTGACTCGTACATTGTGGACGAGAGAGTAGGGTTTGCTGAGCCTGTGCATGGAGTTGAACTTTACTTTTGTCCACCTCATA AGAAAACACTTCAAATTCTCAGCAACATACTTTCAATGGAACAAATTGACCCACTTAATTCTATTGATAATGGTCTTATTGGGGTTATTGTATGGAGAAA AACTAATTTAACAACTTCCTCTATATCACCCACCACTACTACTTTACACCCAAAAAATAGTTTTAAAAGACAAAATTCCTCTAGGAGACAGCAAGATGCA AATTTGAATGCCCATCTCACTCACAAACCAGTGCCCTCTATGGGCCCGAAACCCGTTGAGATTGGACCCCCGTGTGATGATGATGACGACGATGATGGTG ATGTTCCTCCTGGATTCGGACAACCTATTGCCCGTGTCGAGGATGATCTACCGGAGTTCAATTTCTCCACCAATTCAAATTCATCACATGTGTTGGTCCA GAAACCAACGGGACCGAGCATGGTCCCATTTCGCTCGGTTAACCAATCACTCCCTTCCCGCCCTGCGGAACAAATGAGGGAGCTTGTGCACAAATATGGG CAAAACAAAGCAAATGCAACTTCAGTTAACTGGGAGGATAAATTTGGCGGTACAATTCAACCCTGGAACGATGATGATGAAGATGATATACCTGAATGGC AGCCTCAAAATTCCCAGAATCAGTTCCATACCCAACAAACAATGCACAACTTTCATGTAAGACCCCACACGATGAATCAATCATTTCCAAGCTCACACCA GTACCCAATTATGCCAACACAATATCTTCAACCCCCAATGAATGTTACGCATGGACAACGAAATTTTGGTCCACCCTTGGTTCCTTCTGCCCAAGGAAAC AACCTACGGCCTAATGTGGGGCACCCCTATGGAGTGCCTGGCCAAGTGCAAGGCACTACCTGGCCTCAAAATGTTGCTAGAAGTTGGGGATTTTAGCTCC TTTCAAATAGATTTTACTTCCTTTTTAATGTATTTCACATTTTGTAGCCGCGTGTAACTTCAGATAAATGTTAAGGTGTTTCTGTTTTTCTGTGGTGTTA ATTACAGTTGGAACAAAAGAATAACCTTTTTTCCGTTTTAATTTGCTAACAGTGACTAATATTTTGGATAAAACATCTTTCTTTCGCTTGTTAAAAAA
• Tissue: pods
• Gene name: LI_gene_179264;
• Additional information: details;

Expression of Ll_transcript_378317

FPKM

• PAB: 0.2
• PNAB: 0.3
• PS1: 0.2
• PS2: 0
• PS3: 0.1
• PW1: 0.2
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_378317

• Blastp: PHD finger protein 3 from Homo with 40.62% of identity
• Blastx: PHD finger protein 3 from Homo with 40.62% of identity
• Eggnog: PHD finger protein 3(ENOG4111K1A)
• Kegg: Link to kegg annotations (23469)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416504.1)
• Pfam: Transcription factor S-II (TFIIS), central domain (PF07500.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;