Id Trinity | TRINITY_DN50704_c2_g1_i9 |
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Name Transcript | Ll_transcript_378321 |
Sequence | GAGAGGGTGAGTTTCGATGTGACTGTAGGGTCTATTACCTTATGAACGAATGTCATTGGTTCAAATCATCGGAACAACCTCTTCACCCGTGGTGGTAAAG GCTGCATACATCTACTCTCACCGGACTCACTAGGTGGGAGTCTTGTGCATTGGGCTGTGCTGTTTATGTGGTTTAAATATGAAATATCTATTGGTCATTA TGATATTAACATGCATGATTTATGAACTGCTTCAGGTTACTTTATCAACTCAGTCTCTCCTTGCTGTTGTTTTATTTATGGTTAAATATTAACCGTGTTA GATGTCCAACAATCTGGTTTCTGAGCCGATACAAAGCTTGCGGATGGCTCAGTTGGATCCTGTTGTGAACAATGTTGATCCATCAGGTCGACAAATGGAA ATGGGACTTTTAGATTCTGTGTCCACTGTTCCCATGTCACAGCAACAGGCAACCTCAAATTTTCATGTTCGAATGTCCGGGTCTCAAGGCTTACCAACTT CAGTCCCGCAGACTGGACACAGGGTAGAAGCACATTTGAGTAGCCTGGCAATGACTCACCTTTTTTTGCCTCAGAAACAATCCGTGGAAATGGGGACAAT GCCGAATAATATGGGGCCACAGCAAATGTCAACCACTCCCAAGAGGAAGGTGCCAATGGAATTTTCGTCTGGTAGCTCTGTGACATCTAACAAGCGGGTT GCGCATTTGAACAGACCTGTGTTGCAGCAAGTATCTAATACATCAAATAAAGGTTCTCATCAGATGCAATCCCAGTCTAATGCCTCCAGGTCACAGCATG CATCAGCATCTGGTAAGAGAAAAACTCAGATGGAATCCGGTAAACCCGGCACACCTCGTGCCGTGAATCCTAAAAGTCAAAATGCGCAGATTAAGCAAAC TTCCAAGGCTCAATCTGAATCATCTGAAAGTGTCAGATCCAAGATGAGGGAGTCATTAGCTGCTGCTCTAGCCTTGGTTTCTCAGCAAGACAAACCTCTG GCTGTGAATAATAATACACAACACGATGCCTCTAATGTTGAGGGTATATTAAAGAACAACTCTCTGGGAACTGGGTCAGCATCTGCTTCCATCAATACTG CTTTGGAGCAAAAACAGGAAATTTCTCAATCTGCCCACTCCTCTTTCACTGCAGCTGATTCAGTTGAGCACATGATGAGAGAGCAAGGAAAGGGTACAAC CTCTTATGAAGCAGGATCCACAAATGTATATAATGAGGAAAGTATACAAAGTTCTATGAAAGTCTTGAATTGTGATAACTCAGACTTCCAGTCAAGTTAT ACTTTGACTACTGATGATGTTCCTTTCAGTGACAGTTTCTTTGTGAAAGATGACCTTTTGCAGGGGAATGATCTTTCCTGGGTTATATCTGATATGATGG ACATGGAAGACCCAAGGGATTGCCAAATTACTATAGAGCAGAGACCACCTGAGGAAATAGTCAGAGATTGTAGGGAGACAGCCCTTTCACCTGTACTCTT AGCTTCAAGGATAGAAGCAGAACTCTTCAAATTGTTTGGAGGCGTGAATAAGAAGTACAAAGAGAAAGGGAGGTCACTTCTATTCAATTTGAAAGACCGC AATAATCCTGAACTAAGAGAAAGGGTTATGTCCGGTGAAATTCCCCCAGAACAATTATGTTCCATGACTGCGGAGGAACTTGCTTCAAAGGAGCTTTCTC AGTGGCGCATAGCCAAGGCTGAGGAGCATGAGAAAATGGTGGTCTTACATGACTCAGATGTTGATATTAGACGCTTAGTCAAGAAAACACATAAAGGTGA ATTTCAAGTGGAAGTTGATCATGAAGACAATGTCCCAGTGCAGGAGGTTTCTGGTGGAACAACCTTAGTTGCTCGAAACCAAAGAACTAAAAAGGATGTG GAAGTATCTTATCCTAAGCCTGATGTAGTCAAAGGTGATATGAGCACTGATGGTCAGAAGAGCAATTTACAGATGGATAACGTTGGTTCCGATCCAATGC AAGGGCTTATGACAGATGATGCATTGAAGGACCCTGATTTTCTTCCGCCAATTGTATCTCTCGATGAATTCATTGGATCCATTAATTCTGAGTCACCGTT TGTGAGTTTACGTGGGGAGCCTGCAAAAGCAAAACCTATCTCAGACAAGGATGATTCCATGGTTGGAGCTAGATTGAAAGTTTCGGATTTAACTCCAAGT GAGCAAGTTGATGTCACCCCTGATATGCTTGAGAGGGAGAAGCTTCAGAGCACATGCGTCAATCCAGATGCTTCAGAGGGAACAAGGAATAATGCAGAAT CTGGGGGCATTTCTTCCGATATAAAACATGCTGAGAGTCATGTTGACGTGAAGCCGACTGATGGTCATATCAAGGAAAGAGCAATTGATGAAATCAAGTC TTCTTCCGGTGTTGCTGAGTTGAGAGTCAGTCAGTCTCCCGCAAAGGATGAATGTTTCTGGGAGGGAATGCTTCAAGTCAATTCCAATTATTCAGTCATA AGCATCTTTAAAAGTGGTGAAAAAACTTCTGCGAAAGAGTGGCCTGGGCTTCTTGAGATCAAAGGAAGGGTTCGACTTGATGCATTTGAGAAGTTTCTAC AAGAGCTTCGGCTGTCAAGAAGTCGAGCTATCATGATTTTGCATTTTGTTTCCAAAGGTTCAACTCTTCTTGAGGTTGCTGACTCGTACATTGTGGACGA GAGAGTAGGGTTTGCTGAGCCTGTGCATGGAGTTGAACTTTACTTTTGTCCACCTCATAAGAAAACACTTCAAATTCTCAGCAACATACTTTCAATGGAA CAAATTGACCCACTTAATTCTATTGATAATGGTCTTATTGGGGTTATTGTATGGAGAAAAACTAATTTAACAACTTCCTCTATATCACCCACCACTACTA CTTTACACCCAAAAAATAGTTTTAAAAGACAAAATTCCTCTAGGAGACAGCAAGATGCAAATTTGAATGCCCATCTCACTCACAAACCAGTGCCCTCTAT GGGCCCGAAACCCGTTGAGATTGGACCCCCGTGTGATGATGATGACGACGATGATGGTGATGTTCCTCCTGGATTCGGACAACCTATTGCCCGTGTCGAG GATGATCTACCGGAGTTCAATTTCTCCACCAATTCAAATTCATCACATGTGTTGGTCCAGAAACCAACGGGACCGAGCATGGTCCCATTTCGCTCGGTTA ACCAATCACTCCCTTCCCGCCCTGCGGAACAAATGAGGGAGCTTGTGCACAAATATGGGCAAAACAAAGCAAATGCAACTTCAGTTAACTGGGAGGATAA ATTTGGCGGTACAATTCAACCCTGGAACGATGATGATGAAGATGATATACCTGAATGGCAGCCTCAAAATTCCCAGAATCAGTTCCATACCCAACAAACA ATGCACAACTTTCATGTAAGACCCCACACGATGAATCAATCATTTCCAAGCTCACACCAGTACCCAATTATGCCAACACAATATCTTCAACCCCCAATGA ATGTTACGCATGGACAACGAAATTTTGGTCCACCCTTGGTTCCTTCTGCCCAAGGAAACAACCTACGGCCTAATGTGGGGCACCCCTATGGAGTGCCTGG CCAAGTGCAAGGCACTACCTGGCCTCAAAATGTTGCTAGAAGTTGGGGATTTTAGCTCCTTTCAAATAGATTTTACTTCCTTTTTAATGTATTTCACATT TTGTAGCCGCGTGTAACTTCAGATAAATGTTAAGGTGTTTCTGTTTTTCTGTGGTGTTAATTACAGTTGGAACAAAAGAATAACCTTTTTTCCGTTTTAA TTTGCTAACAGTGACTAATATTTTGGATAAAACATCTTTCTTTCGCTTGTTAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_179264; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_378321
Blastp | PHD finger protein 3 from Homo with 40.62% of identity |
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Blastx | PHD finger protein 3 from Homo with 40.62% of identity |
Eggnog | PHD finger protein 3(ENOG4111K1A) |
Kegg | Link to kegg annotations (23469) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019416504.1) |
Pfam | Transcription factor S-II (TFIIS), central domain (PF07500.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |