Ll_transcript_377293

Id TrinityTRINITY_DN50706_c7_g1_i6
Name TranscriptLl_transcript_377293
SequenceGCCGAAGCCATAGTAAGGGAAAGGAAGCAAGATGGAGAAGGAGGAAGAGAACAATAGAAATAAGAAGAAGCAAGTAATCACAATACCTTCATATGAAGAA GTAGTTTCAAGTTCGCTATCGAAATCAACTCCTCCCTCTCTCTTCGTTCCTTCTCACTCTCAAACGCAAACATTCTCCGAAGCTTTTTCGTTTCTCAAAT CATCCGAGTTCTACTCTCCACCACCACCTCCACCTCCTACCACCACCGCCCCTTCGCCATCTTCTTTATCAAGGGAAAGTGCACCGTCTTCAACGTCCAC GTCATCTGCTTCTGCGGTTCCTGCACCTTCATCATCTCAAAATCGCAATGCAATCCTTGTCAGTAACAGACAGAAGGGAAATCCGTTGCTCAAACACATT AGGAATGTTAAATGGATATTTGCTGATGTTGTTTGTGATTACTTGCTTGGCCAAAGCTCTTGTGCTCTCTATATCAGCCTTCGGTATCATCTGCTGCATC CAGACTACTTATATTACAGAATAAGGGAGTTGCAGAAGAATTTCAAGCTTCGTGTAGTTTTATGCCATGTCGATGTGGTCAGACCCCTGTTATATACTTA TTCAAACCTCTAGTTGCATCTATTTTGGTTTATGTTCACAAATGATTCCATTGTCTATATGAAGTGACATTTTCCTTATTTATTTCTTATTGGTCGCAGG AGGATGTGAAAAAGCCTCTACTTGAAGTTACAAAAACAGCTCTGCTTCATGAATGTACCCTCTTATGTGCATGGAGCTTGGAGGAATGTGGCCGTTACTT GGAGACCATAAAAGTCTATGAAAACAAGCCTGCAGACATTATTCAAGGCCAAATGGATACAGATTATCTATCACGTCTAACACATGCTCTTACGACGGTT CGCCATGTTAACAAGACTGATGTTGTCACTCTTGGTACTACATTTGGGTCTCTATCTCACGTTATGGGTGCATCTATGGAAGATTTAGCTCGTTGCCCTG GCATAGGAGAGAGAAAGGTCAAGCGCTTGTGGGACACGTTCCACGAACCTTTTAAGCGTGTGGAATCCAGTAGACAACCTATTCCAGAGACTTCTGTCCA GAACAATCCAGCTAGTCTAGATACATCAATCAGGAACAATGCTGAATCTTCCTCCGTTAATGAAGAGAAGCAAAAGGATGTAGAAGATGTGAGCAAACGT AGGAAGAAAGAACCTGAACTTTCCGTGAAATCTGCCCTCTCTGTGGCTTTTGCCAAATATTCCAACAGAGTTGGAAAGAGGAACAGCACTTCACAAGTCA AGGGAAATGGAGAGCAAGAAGCTGAAACATAAAATTACCATTAAGTTTTATGCTGATTTGTTAATTTTCCCTTGAGCAAGGCAGTCACGTAAAAAACATG GAACTCTTCTTTGGTTTAGAAGCAGTATGGGCTCCTTTAAATTTTATTGATTCTGGAACTTGCCCTTCCCTGCACATATAGGTTTGTGCTGATCCAGACG CAGATTCAGAGTGAGATCCTGAAGATTTAAATTTAAATACTGATTACTGTGTAATAACTTTGTAACTTTACTGGCAAAAGACAATAAAAAATGTATTATT ACATGAAGAGATATCTGTGGGACGTGGTAAAGGACATTTGGCCCAATATCCTGGTTCTCTGTTACAAATGGTAATAATTTCACGTCATTCAGTTTTGGCT CCTCCTCTGTTTGGTCTTCCTTATAAATTTATCTATCTTGAATCTGAGGGTTGGTTGCCAGGATCATTTTGCTTGATGTTTTATCCTGGATAATCCTGGA AATATCTATTGAAATGGCCTGAAGCGGTTCCTGTTGTGCTTTCAAGCATTTTGGGGAATCCCTCACATTCAGCCAAGGAAATAGTGAGTCCAAACTCCAG ACAGGCAGCAGGGGTAATGGAATTCAACTGTTCAAAGTTGGCTATTTGGTGATTCCCCCATCAAGTATGAAATTGCGTCCCCCTACTATCTCATTACAAG AATGAAAAGCACTTGCTTCTAGGGCAGCAGCTTCTGCTATTCTCAAGCAGGACAGTGAAGAAGCATGATGCAGTCCTAATGACTGGGACTAGGACTAGGT GTTTGTCTTTGAAATCTCAAGGAACTTGTGCCTAGAGAAGATGGGTTCCTAACTAGTGGTATCAGTGATTGTGCAACATCTGTCATGAGGGGCCTGTAAT CAGCTTCTGGCTGTATGCACATTGCTGCAATGGCAGCTACCTGTAGAACCCCACAGTAGCAGAAAGAATATGGTTAGTTATCAGGAATAGTGTGAGTAGT CTATTTTTTATAGGCAGAGTTCTGTTTTCTTTCTTTTTTTAAAGGGGAGGGGGTAGAGCAACTATGGAGGTTTAAACCCAGACGCCCACTCTTAATGTCA TGCATATCTACAATTGATCTTGAGGACAATAATATGAGCAGTCTAAGTCATCAAGGATAATATAAGTGAAACAATCACTAATCAATCAAAATTTCACCTG AATTAAATCCTTCTTAGAGTACTGTCCACGTAGAGTTGGATCAACCATTTCCAC BLAST
Tissuepods
Gene nameLI_gene_179284; 
Additional informationdetails; 

Expression of Ll_transcript_377293

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_377293
BlastpDNA excision repair protein ERCC-1 from Arabidopsis with 59.44% of identity
BlastxDNA excision repair protein ERCC-1 from Arabidopsis with 63.73% of identity
EggnogExcision repair cross-complementing rodent repair deficiency, complementation group 1 (Includes overlapping antisense sequence)(COG5241)
KeggLink to kegg annotations (AT3G05210)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019427809.1)
PfamHelix-hairpin-helix domain (PF14520.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;