| Id Trinity | TRINITY_DN50706_c7_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_377295 |
| Sequence | ATAAGTTTCAGTACTTTCAGTAACCACCTATTAGGGATGCAGTTCATATGTTGATTAAGTTCTATACATGATCATCACATTGGCTGAAGCTATTTTACTT TCAACTGTAGCTAACACATGCTCTTACGACGGTTCGCCATGTTAACAAGACTGATGTTGTCACTCTTGGTACTACATTTGGGTCTCTATCTCACGTTATG GGTGCATCTATGGAAGATTTAGCTCGTTGCCCTGGCATAGGAGAGAGAAAGGTATATTTCTGGCCCGGAAATTGAGACAGGGCAATGGTTTGTACTTTTT TTCTTGTGGATGTGGCTGGATGAATTGCTGCCAGTGCCACTACCCGCAGTGGTAGTAACCATAAAAAATGAATATTCTGTACACTTTCTGTTATCAGGTC AAGCGCTTGTGGGACACGTTCCACGAACCTTTTAAGCGTGTGGAATCCAGTAGACAACCTATTCCAGAGACTTCTGTCCAGAACAATCCAGCTAGTCTAG ATACATCAATCAGGAACAATGCTGAATCTTCCTCCGTTAATGAAGAGAAGCAAAAGGATGTAGAAGATGTGAGCAAACGTAGGAAGAAAGAACCTGAACT TTCCGTGAAATCTGCCCTCTCTGTGGCTTTTGCCAAATATTCCAACAGAGTTGGAAAGAGGAACAGCACTTCACAAGTCAAGGGAAATGGAGAGCAAGAA GCTGAAACATAAAATTACCATTAAGTTTTATGCTGATTTGTTAATTTTCCCTTGAGCAAGGCAGTCACGTAAAAAACATGGAACTCTTCTTTGGTTTAGA AGCAGTATGGGCTCCTTTAAATTTTATTGATTCTGGAACTTGCCCTTCCCTGCACATATAGGTTTGTGCTGATCCAGACGCAGATTCAGAGTGAGATCCT GAAGATTTAAATTTAAATACTGATTACTGTGTAATAACTTTGTAACTTTACTGGCAAAAGACAATAAAAAATGTATTATTACATGAAGAGATATCTGTGG GACGTGGTAAAGGACATTTGGCCCAATATCCTGGTTCTCTGTTACAAATGGATCATTTTGCTTGATGTTTTATCCTGGATAATCCTGGAAATATCTATTG AAATGGCCTGAAGCGGTTCCTGTTGTGCTTTCAAGCATTTTGGGGAATCCCTCACATTCAGCCAAGGAAATAGTGAGTCCAAACTCCAGACAGATTTGAA GATGCTAATCAAGAATGTTTTTTGTAGTATATCCCTAACAAATACCATTGCTCAAGTCAAATGTGATGCCATAAAGTATAAAGAAGTCTGAATATATTAA GGATGTCATGAATGTCATGTGATATGTTGTAACTTGTAAAAGTCTTCTCTCATTTAAATAACTTGTTTCTTGTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_179284; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_377295
| Blastp | DNA excision repair protein ERCC-1 from Arabidopsis with 45.45% of identity |
|---|---|
| Blastx | DNA excision repair protein ERCC-1 from Arabidopsis with 79.17% of identity |
| Eggnog | Excision repair cross-complementing rodent repair deficiency, complementation group 1 (Includes overlapping antisense sequence)(COG5241) |
| Kegg | Link to kegg annotations (AT3G05210) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427809.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |