Ll_transcript_379486

• Id Trinity: TRINITY_DN50709_c0_g1_i1
• Name Transcript: Ll_transcript_379486
• Sequence: CGGGTCAGATTTGAGTTATCCAAGGATAATACTCCACTCCAGTCTCCACATTATTTTAGAATTTATAACTTGTTTACAATTAGGTATAAATAGTATGACC TTTTGATTTATATCACTAACCTTTTGCATAACAAGATAACATATTAATATTCTTATTACTTGTTTTCAGATATATGTTGTAAAATACACTCTAGTGCTAG TATTTTGCTTCTTTAATTATGTGATTTAGCTTAGCGTGATATTTTAAACTTTTAAATTTCGCCAACATATCGGTTTTAAAAATTTTGTTTCAATTTATGT ATCGAAGCAAAAACATTCAGTTGGGTTGAATTAATAAAGGGATAAAGCTCGGTTTGTTGGCTCCAATTATAGGCAAATAGTCCTTGTCGAGTTGGGTTTG GTTCAAGTAAACGACCTTATCAAAATTTCAGTTTGGGTTAAGGCCAAGCCAAACCTGTTCCTGCCCATCTGTTAAGCATTCCAGAAGAGAAATAACTAAT GGTAAACTAACCTGAAACATATTGTGCAGGCTTTTATTTTATTCCTGGGGCATTGAGCGTAGAGAAACAATGTACTTTGATAAGGGAGAGCTTGACTGAT TTCCCGCAGCCACCTAACCGAACAAACCACAATGCTATATATGGTCCTATACACGATCTATTTGTTGCGGCAAAGGAAGGAAAAGTTTTAATTGAAGATG TCTCTCCGATTAGTTCATCTGAAGCCGATCCTGATTTCGGACATAGAGATGGTAAGGGATGGACATTTACTACGGAAAAGGATGAGTCCCTGAGGAAATG CAAATCCATTTCTGCTTCTGCTTTGCTGCGGAAGTTGCGATGGAGCACCCTTGGCTTACAGTTTGAATGGTCCAAGGTATGTTCTGATTTACCACTTCAA ATATTTCCCAGGTGTATTTTTCTCCAGGAAATTGATTGTTTTGCTATTTAGTTGATGTGCGGACTTATTTCGTGTTGGAAATATTATCATATTAGTCATA TCTACTACTTATGTATATTATAAAAATTTTGCTTTGGGAAAGTGGTAGCTGATTGTTGACTTACTGATGATATGCTGCTTAGCATGTATAGATTTTTATC TAGAGAGGACCCATATTTCTATTTGTGAATGAGGTGTAAGACAATTGGTTGCAAAAATTGGCTTATGAATTCAGATAGCACCTCTATGTCCATGGTTACT TGGCTTATGAATTTAAAGTTCTGAATTTATGGCTATTATTCTATGGTTACTTGGACCAAATCTTAAATTTTACAAGGCTGTAGGAATTCATTCTACCCTC TTGTAAAGATGTCAAACTATACCTCTTTTTGCTAAGGTCTGCATGTGCTTTGAGCCTGTTGGGAGATATAATTTCCACTTCTACAAACCATGTACAATAT TCAGGGTATCACTCTGTGATTATGTTTGTGTGCAGCGGAATTACGATGTATCTCTCCCGCATAACAAAATTCCCGAAGCACTCTGTGAGCTAGCTAAACA ATTGGCGAAACCTGCATTGCCTGCTGGTGTTGATTTTCAGCCTGAAGCTGCAATAGTGAATTACTTCGGCTCAGGTGACACACTTGGTGGCCACCTTGAT GATATGGAAGCAGATTGGAGCATGCCTATAGTTAGTTTAAGTTTGGGATGCAAAGCTATATTTCTTTTGGGAGGAAAATGTAGGGAGGATCCTCCCCTGG CAATGTTCCTTCGAAGTGGTGATGTTGTACTCATGGCTGGAGAAGCTAGAGAATGCTTTCATGGTGTTCCTCGGATATTCACAGATAGAGAAAATGCTGA AATAGGCCCTCTTGAGGAACAGTTGACACATGAAGATGACCTTTGTTTCTTAAAATACATTCAAACTTCAAGAATTAACATAAATATCAGACAAGTCTTT TGAGTTGTATTTTCCTCGGATATAAAAAAATTGTCTCTTCCTTATGGTCTGAACTTGTCCTATACACCTTGCTAATTCTTTTGGATATTTTATCCAAGGT AGTAGTTTATTGTTTTTTTAATCTTTTCCTGTGTACCGAAAAAATGAAGTTTTGTATGATTAGCTGATGAATAAAAAGAAAGGATATATCATTAACATTT AATATGGCTATGGCCTCATTTTTATATGTTATGTTGTTG
• Tissue: pods
• Gene name: LI_gene_179308;
• Additional information: details;

Expression of Ll_transcript_379486

FPKM

• PAB: 0.1
• PNAB: 0.1
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0.3
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_379486

• Blastp: Alpha-ketoglutarate-dependent dioxygenase alkB from Arabidopsis with 76.28% of identity
• Blastx: Alpha-ketoglutarate-dependent dioxygenase alkB from Arabidopsis with 76.28% of identity
• Eggnog: Alkylated DNA repair protein(COG3145)
• Kegg: Link to kegg annotations (AT1G11780)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414706.1)
• Pfam: 2OG-Fe(II) oxygenase superfamily (PF13532.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;