Ll_transcript_379487

• Id Trinity: TRINITY_DN50709_c0_g1_i2
• Name Transcript: Ll_transcript_379487
• Sequence: AGTGAATTACTTCGGCTCAGGTGTGCCTATAAGCAAGTTTTATTATATGAACTGTCTGTATGATAATCCCACATGTCCTTTTGAAAGTCATTTTAAAATT TAATTCTGGTCCACTGTGAACGTTAAGTTTTAACACTATCGGGATGCTAGGAAGTGTCATATCATTGTAGAACTAAAGTTTTCCGTTGCAGTAAAAGCTC TAAACTGTTAGCTCAATTTATTTCAGTAACTAACTAACTAACTAACTGCTCAGCACTCTGATTCATATGTTGTTTCAGGTGACACACTTGGTGGCCACCT TGATGATATGGAAGCAGATTGGAGCATGCCTATAGTTAGTTTAAGTTTGGGATGCAAAGCTATATTTCTTTTGGGAGGAAAATGTAGGGAGGATCCTCCC CTGGCAATGTTCCTTCGAAGTGGTGATGTTGTACTCATGGCTGGAGAAGCTAGAGAATGCTTTCATGGTGTTCCTCGGATATTCACAGATAGAGAAAATG CTGAAATAGGCCCTCTTGAGGAACAGTTGACACATGAAGATGACCTTTGTTTCTTAAAATACATTCAAACTTCAAGAATTAACATAAATATCAGACAAGT CTTTTGAGTTGTATTTTCCTCGGATATAAAAAAATTGTCTCTTCCTTATGGTCTGAACTTGTCCTATACACCTTGCTAATTCTTTTGGATATTTTATCCA AGGTAGTAGTTTATTGTTTTTTTAATCTTTTCCTGTGTACCGAAAAAATGAAGTTTTGTATGATTAGCTGATGAATAAAAAGAAAGGATATATCATTAAC ATTTAATATGGCTATGGCCTCATTTTTATATGTTATGTTGTTG
• Tissue: pods
• Gene name: LI_gene_179308;
• Additional information: details;

Expression of Ll_transcript_379487

FPKM

• PAB: 0.1
• PNAB: 0.4
• PS1: 0.2
• PS2: 0
• PS3: 0.1
• PW1: 0.3
• PW2: 0.2
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_379487

• Blastp: Alpha-ketoglutarate-dependent dioxygenase alkB from Arabidopsis with 77.78% of identity
• Blastx: Alpha-ketoglutarate-dependent dioxygenase alkB from Arabidopsis with 77.19% of identity
• Eggnog: Alkylated DNA repair protein(COG3145)
• Kegg: Link to kegg annotations (AT1G11780)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_004502292.1)
• Pfam: 2OG-Fe(II) oxygenase superfamily (PF13532.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;