| Id Trinity | TRINITY_DN50709_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_379488 |
| Sequence | CGGGTCAGATTTGAGTTATCCAAGGATAATACTCCACTCCAGTCTCCACATTATTTTAGAATTTATAACTTGTTTACAATTAGGTATAAATAGTATGACC TTTTGATTTATATCACTAACCTTTTGCATAACAAGATAACATATTAATATTCTTATTACTTGTTTTCAGATATATGTTGTAAAATACACTCTAGTGCTAG TATTTTGCTTCTTTAATTATGTGATTTAGCTTAGCGTGATATTTTAAACTTTTAAATTTCGCCAACATATCGGTTTTAAAAATTTTGTTTCAATTTATGT ATCGAAGCAAAAACATTCAGTTGGGTTGAATTAATAAAGGGATAAAGCTCGGTTTGTTGGCTCCAATTATAGGCAAATAGTCCTTGTCGAGTTGGGTTTG GTTCAAGTAAACGACCTTATCAAAATTTCAGTTTGGGTTAAGGCCAAGCCAAACCTGTTCCTGCCCATCTGTTAAGCATTCCAGAAGAGAAATAACTAAT GGTAAACTAACCTGAAACATATTGTGCAGGCTTTTATTTTATTCCTGGGGCATTGAGCGTAGAGAAACAATGTACTTTGATAAGGGAGAGCTTGACTGAT TTCCCGCAGCCACCTAACCGAACAAACCACAATGCTATATATGGTCCTATACACGATCTATTTGTTGCGGCAAAGGAAGGAAAAGTTTTAATTGAAGATG TCTCTCCGATTAGTTCATCTGAAGCCGATCCTGATTTCGGACATAGAGATGGTAAGGGATGGACATTTACTACGGAAAAGGATGAGTCCCTGAGGAAATG CAAATCCATTTCTGCTTCTGCTTTGCTGCGGAAGTTGCGATGGAGCACCCTTGGCTTACAGTTTGAATGGTCCAAGCGGAATTACGATGTATCTCTCCCG CATAACAAAATTCCCGAAGCACTCTGTGAGCTAGCTAAACAATTGGCGAAACCTGCATTGCCTGCTGGTGTTGATTTTCAGCCTGAAGCTGCAATAGTGA ATTACTTCGGCTCAGGTGACACACTTGGTGGCCACCTTGATGATATGGAAGCAGATTGGAGCATGCCTATAGTTAGTTTAAGTTTGGGATGCAAAGCTAT ATTTCTTTTGGGAGGAAAATGTAGGGAGGATCCTCCCCTGGCAATGTTCCTTCGAAGTGGTGATGTTGTACTCATGGCTGGAGAAGCTAGAGAATGCTTT CATGGTGTTCCTCGGATATTCACAGATAGAGAAAATGCTGAAATAGGCCCTCTTGAGGAACAGTTGACACATGAAGATGACCTTTGTTTCTTAAAATACA TTCAAACTTCAAGAATTAACATAAATATCAGACAAGTCTTTTGAGTTGTATTTTCCTCGGATATAAAAAAATTGTCTCTTCCTTATGGTCTGAACTTGTC CTATACACCTTGCTAATTCTTTTGGATATTTTATCCAAGGTAGTAGTTTATTGTTTTTTTAATCTTTTCCTGTGTACCGAAAAAATGAAGTTTTGTATGA TTAGCTGATGAATAAAAAGAAAGGATATATCATTAACATTTAATATGGCTATGGCCTCATTTTTATATGTTATGTTGTTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_179308; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_379488
| Blastp | Alpha-ketoglutarate-dependent dioxygenase alkB from Arabidopsis with 77.78% of identity |
|---|---|
| Blastx | Alpha-ketoglutarate-dependent dioxygenase alkB from Arabidopsis with 68.98% of identity |
| Eggnog | Alkylated DNA repair protein(COG3145) |
| Kegg | Link to kegg annotations (AT1G11780) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414707.1) |
| Pfam | 2OG-Fe(II) oxygenase superfamily (PF13532.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |