Ll_transcript_379157

• Id Trinity: TRINITY_DN50710_c1_g1_i10
• Name Transcript: Ll_transcript_379157
• Sequence: CGCAACCTCAACAACCACCACCGCCTCAAAACGCTACCCTCCCTGCGCCATAAAATACAGCGAATACACTCCGTGCGAGGACCACGACCGTTCTCTACGG TACTCACGTAAAAACATGATATACAGAGAGCGACACTGCCCTGAAAAGAAGGAGATTCTGAAATGCCGTATACCAGCGCCACACGGGTACCGTAACCCGT TCCCATGGCCAGAGAGTAGGGATGTGGCGTGGTACGCAAACGTACCTCACCGGGAGCTGACGGTGGAGAAAGCCGTGCAGAACTGGATCCGGTTCAATGG TGACCGGTTCAAGTTTCCCGGTGGTGGAACGATGTTTCCGTTCGGTGCTGATAAGTATATTGATGATATTGGAAAGATGATTAATTTGAAAGATGGGTCT ATTAGAACAGCCGTTGATACTGGATGTGGGGTTGCTAGTTGGGGAGCATATCTTCTATCTCGTGACATATTAACAGTGTCAATTGCACCAAGGGATACCC ATGAAGCACAAGTTCAATTTGCTCTTGAGAGAGGAGTTCCTGCAATTATTGGAGTCCTAGCCTCTAAGAGGCTCCCTTTCCCCTCTAGAGCTTTTGACAT GGCACATTGCTCTCGCTGCCTCATTCCATGGGGTGAAAATGATGGACTTTGGCTGAATGAAGTTGATAGAATTCTACGCCCTGGTGGGTATTGGATTCTA TCTGGTCCACCAATTCATTGGAAGAAATACTGGAAAGGGTGGGAAAGAACAAAGGAGGATTTGAATGAAGAGCAGACCAAAATTGAGATGGTGGCTAAAA GCCTGTGCTGGAACAAGCTAGAGGAAAAGGGTGATATTGCTATTTGGCAGAAACCGAAAAACCATTTAGACTGCAAAGCCAATCGTAAGATCTCACAAAA AAGGCCTTTCTGCCAAGCACAGAGTAACCCAGACAAGGCCTGGTACACAGATATGCAAACATGTTTGAGTCCTCTGCCTGAAGTGTCTAGCAAAGAAGAA ACTTCAGGTGGAGCATTGGAGAATTGGCCTAAGAGAGTTAAAGCCACCCCACCAAGGATTTATAAAGAGACCATAAAAGGGGTTACTCCTGAAACTTTCA AAAACGATAATAAACTTTGGAAGAAAAGAATTTCATATTATAAGAATGTTAACAATCAACTAGGACAAGCTGGGAGATATCGCAACCTTTTAGACATGAA TGCTTACTTGGGTGGATTTGCAGCTGCACTTGTTGATCTTCCTGTTTGGGTCATGAATGTGGTTCCGGTCCAGGCCAAGGTTAACACACTTGGAGCAATA TATGAACGGGGATTGATTGGAACATACCATGATTGGTCAGATAAATATTCTCTTTTTTAATGAACCCCTCTCTCCCTTTTCCTTTCTGAAATACTCGTGG CCTTCAATTCTCTTGCAGGTGTGAAGCAATGTCCACTTATCCTAGAACTTATGACTTAATTCATGCTGATTCACTTTTCAGTCTTTACAGCCACAGGTAT ACTTTTATTCTGCTTTACAGATTATTATTTTCAAGACAGTTTTTACTGAAAATGGCAATAGAATTGAGAAACATTAAGCTATGAAAACAAACCAAGAAGA AGGTTCAAACATATTTCATTACTTGTAAGGTATATGTAAAGGTTCAAGCCTTGTAATAAAATATGATTAATATTGTTTCCTATTGTAGCTGTGAATTGGA AAACATTTTGCTAGAGATGGATAGGGTTCTTAGACCTGAAGGAAGTGTGATAATCCGAGATGATGTTGATATATTGGTAAAAGTAAAGAGTATAACCAAT GGCATGGATTGGGATAGTCAAATTGTTGATCATGAAGATGGGCCTCTTGAAAGAGAGAAGCTTTTATTTGCTGTGAAGAAATATTGGACAGCCCCTGCCT CTTCTGAGCAGGATAGTTAGCCACTTTAGTCTTTTAGAGCCCCTTTCCTTTAGTTTTTATCTTCTACTATTTCACTCTTTGTTTTTCTCTTCTGTTTTTG TTATTTTTTTGTATTTGTTTATGGCAATTTTTTCTTTTAAATGTTTTTTGGGGCTTGTCATAGCAAATTTTAGTGAATGCAAGTTCAGTTTAACTGTGCA TACACCAAACTCAGGCTAACCATTGCCATGTTTTGGTCAAGAATCATGTTTTACTCCGTAATGTTTTTCAGAGGCAGTAGCCTGATATAATTATACAAAC ACAAAGTGAACAAACCTAAAAGTAATGCTAGGTGCACAAATCATGTCCAAGAACTTTTTACAGAGAAAGTCACTTTAATCATAAAAAAGAGTTAGAGTTG TTTTTTTATTTGAAAG
• Tissue: pods
• Gene name: LI_gene_179315;
• Additional information: details;

Expression of Ll_transcript_379157

FPKM

• PAB: 0.4
• PNAB: 3.8
• PS1: 1.8
• PS2: 0.3
• PS3: 0.8
• PW1: 0.8
• PW2: 2
• PW3: 1.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_379157

• Blastp: Probable methyltransferase PMT16 from Arabidopsis with 66.96% of identity
• Blastx: Probable methyltransferase PMT16 from Arabidopsis with 67.49% of identity
• Eggnog: Methyltransferase(ENOG410YAWV)
• Kegg: Link to kegg annotations (AT2G45750)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449623.1)
• Pfam: Putative S-adenosyl-L-methionine-dependent methyltransferase (PF03141.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;