| Id Trinity | TRINITY_DN50710_c1_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_379158 |
| Sequence | ACTGGATACGGTTTGAAGGTGATCGGTTCAGGTTCCCCGGTGGTGGGACCATGTTTCCGTTGGGAGCTGATAAGTATATTGATGATATTGGAAAGTTGAT TAATCTCAAAGATGGTTCTATTCGGACCGCTGTTGATACCGGATGTGGAGTTGCTAGTTGGGGAGCATATCTTCTATCACGTGACATATTAACTGTGTCA ATTGCACCAAGGGACACTCATGAAGCACAAGTTCAGTTTGCTCTTGAGAGAGGAGTTCCTGCCATAATAGGAGTTCTAGCCTCTAAGAGGCTCCCTTTTC CTTCTAGAGCTTTTGACATGGCACATTGCTCTCGCTGCCTCATTCCATGGGGCGAAAATGATGGAGTTTCGCTAAATGAAGTTGATAGAATTCTACGCCC TGGTGGGTATTGGATTCTATCTGGTCCACCAATACATTGGAAGAAATATTGGAAAGGATGGGAAAGAACAAAGGAGGATTTGAATGAAGAGCAGACCAAA ATTGAGAAGGTAGCTGAAAGCCTGTGCTGGAACAAGATAGAGGAAAAGGGTGACATTGCTATTTGGCAGAAACCCAAAAACCATTTAGATTGCAAAACCA GCTGGAACCTCTCACCAAAAAGGCCTTTCTGCCAAGCACAGAATAACCCTGACAAGGCCTGGTACACCGATATGCAAACATGTTTGAATCATCTGCCTGA AGTGTCTAACAAAGATGAAACCGCAGGCGGGGCATTGGAGAATTGGCCTAAGAGAGTTAAAGCCACCCCACCAAGGATTTATAAAGGGGCCATAAAAGGG GTTACTCCTGAAACTTTCACAAAGGATAATAAGCTATGGAAGAAAAGGGTATTATATTATAAGAATATTAACAATCAACTAGGACAAGCCGGGCGATACC GCAATCTTTTAGACATGAATGCATACTTGGGTGGATTTGCAGCTACACTAGTTGATTATCCTGTTTGGGTCATGAATGTGGTTCCTGTCCAGGCTAAGGT TAACACACTTGGAGCAATATATGAACGGGGATTGATTGGAACTTACCATGATTGGTGTGAAGCAATGTCTACTTATCCTAGAACTTATGACTTAATTCAT GCTGATTCATTGTTCAGCCTTTACAGTAACAAGTATGCTTATATTTTGGTTACAGGTTTTTATTTTCAAGTCAATTTTTGAGTGAATGGATACAAAATCG ACAAATACTAAGCCATTAAAACAAACCAAGAAGTTTTAAACACATTCTAAATGATGTTTTTGGTAACAACAATAAACTCTGTCTATACTAACATGAAACT TAGCTTACTGCATTTTTTATATAACTTCCTGATCTTAGAAGTTATAAGGGCATTTGATTATTTGAAATATTAGATGTAATTCAAAAGATTCAAGCCTTGT GAAATCTGATTAACATGTTTTGTTCTTGTAGATGTGAATTGGAAAACATTTTGCTAGAAATGGATAGGATTCTTAGACCTGAAGGAAGTGTAATAATCAG AGATGATGTTGATATATTGGTAAAAGTAAAAAGTATAATCAATGGCATGGATTGGGACACTCAAATTGTGGACCATGAAGATGGGCCTCTTGAAAGGGTG AAACTTTTATTTGCTGTGAAGAAATATTGGACAGCCCCTGCATCTTCTAACCAGAATAGTTAACACTTTTAGTCTGTTAGTTTTTCTCTTCTGTTTTTGT TATTCTTGTGTTTGATTACTTTAATTTCTTGGAGGGCTTGTGTTAGCAAATTTTATTGAATGCAAATTCAGTTTAACTGTGCATAACATCAAATTCAGGG TAATCATTGTCATGTTTTTCTCAAGAATGAAGTGTTAATATGTAGTGATTTTCATAGGCATTAACTTATTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_179315; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_379158
| Blastp | Probable methyltransferase PMT16 from Arabidopsis with 69.47% of identity |
|---|---|
| Blastx | Probable methyltransferase PMT16 from Arabidopsis with 69.47% of identity |
| Eggnog | Methyltransferase(ENOG410YAWV) |
| Kegg | Link to kegg annotations (AT2G45750) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019465188.1) |
| Pfam | Putative S-adenosyl-L-methionine-dependent methyltransferase (PF03141.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |